Aggregatimonas sangjinii: FGM00_14500
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Entry
FGM00_14500 CDS
T07837
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
asag
Aggregatimonas sangjinii
Pathway
asag02020
Two-component system
asag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FGM00_14500 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FGM00_14500 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asag03021
]
FGM00_14500 (rpoN)
Transcription machinery [BR:
asag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FGM00_14500 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Acyl-CoA_dh_C
HTH_12
SurA_N_3
CLZ
Motif
Other DBs
NCBI-ProteinID:
QCX01261
UniProt:
A0A5B7SWE5
LinkDB
All DBs
Position
3456949..3458406
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AA seq
485 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKEESETIDDDF
DSEFDDSTDNETIETEDINIDDYLSDDEIPDYRTKANNYSADDDEKSVPYAAGTSFNQYL
ISQLNTVYLSDEEWSIAEFLVGSVDESGYIRRPITDILDDLAFTQNIYTDEQTILKVLKM
VQELDPPGVAARSLEECLIIQLKRKEPNPSVELAIAILEKSFDQFTKKHYKKLIQKHGIT
EEQLKDAISEIEKLNPKPGGSYAGNNRMIEHVVPDFSIRIVEGELELTLNGRNAPELRVS
REYNNMLKGYKAAKDKSKSQKDAVMFIKQKLDAAKWFIDAILQRQQTLFVTMSAIMNYQK
EYFLTGDERNLRPMILKDIADEIDMDVSTVSRVANSKYVDTPYGTKLIKEYFSESMKNDQ
GEDVSTKEIKKILETVIAEETKKKPLTDDRLATILKEKGYPIARRTVAKYREQLDIPVAR
LRKQI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaacacttacagtttaaattatcgcaaaagctatcgcctcagcagattcag
ttgatgaagttgatacaattgcccacccaggcattcgaacaacggctaaagcaggaactg
gaggaaaacccggcattggaaagtggtaaggaggagagtgaaaccattgacgacgacttc
gattcggagttcgatgacagcactgataacgagaccatcgagaccgaggacattaatatt
gacgattacctgagtgacgatgaaattcccgattataggaccaaggccaataattatagt
gcagatgatgatgaaaagagtgttccctacgctgcgggcacatcttttaatcagtatctg
atcagccaattgaataccgtttaccttagtgatgaggaatggagtatcgccgaatttctg
gttggtagtgtcgacgaaagcggctatatccgcagaccgattacagacattctagacgat
ctggcctttacccaaaacatttatacggacgagcagacgattctgaaagtactgaaaatg
gttcaggaattggatccgccaggggtggcggcacgttctttggaggaatgcctcatcatt
cagttaaagcgaaaggagcccaacccgagcgtagaactcgccattgcgatactcgaaaaa
tcgttcgaccagtttacgaaaaaacactacaaaaagcttattcaaaagcatggcattacc
gaggagcaactaaaagatgctatttccgaaatcgaaaaattgaaccccaagccgggaggt
tcctatgcgggcaacaaccgcatgatcgaacatgttgtgcccgatttctccataagaatc
gtagaaggtgaacttgaactcacccttaacgggagaaacgctccggaattacgtgtttcc
agggagtacaacaatatgctcaagggctacaaggctgctaaggataaatcgaaatcacag
aaagatgccgtcatgttcatcaagcagaaactcgatgccgccaagtggtttatcgatgcc
attttacaacggcagcaaacccttttcgtgaccatgagtgcgatcatgaactatcaaaaa
gaatattttttaacaggggacgagcgcaatctgcgccctatgatcttaaaggatatcgcc
gacgaaatcgatatggatgtctcaacggtttcccgagtggcgaacagcaagtatgtcgac
actccgtatggcacaaaactcatcaaagagtacttttccgaatcgatgaagaacgaccaa
ggggaagatgtatcgaccaaggaaatcaaaaaaatattggaaaccgttattgcagaggag
accaagaaaaaaccacttacggatgaccgactggccaccatcctcaaagaaaagggttac
cctattgcccggagaacggttgcaaaataccgggaacagttagacatacccgtagcccgt
ttacgaaagcagatctaa
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