Aggregatimonas sangjinii: FGM00_19385
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Entry
FGM00_19385 CDS
T07837
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
asag
Aggregatimonas sangjinii
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asag03032
]
FGM00_19385
03036 Chromosome and associated proteins [BR:
asag03036
]
FGM00_19385
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_19385
DNA replication proteins [BR:
asag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FGM00_19385
Chromosome and associated proteins [BR:
asag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FGM00_19385
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FGM00_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QCX02173
UniProt:
A0A5B7SYI7
LinkDB
All DBs
Position
complement(4660180..4660470)
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AA seq
96 aa
AA seq
DB search
MTKAEIVAKISDKLGMEKGDVQATVESFMEEVKSSLESGNNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIAAHNIPAFKPAKVFVEGVKSNVLIK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcggaaattgtagcaaagatctcggataaactgggaatggaaaaaggagat
gttcaggcaactgtggaatcctttatggaagaagttaaatcttcattggaaagtggcaat
aatgtgtatttaagaggttttggaagttttattatcaaaaccagagcggagaaaacaggt
agaaacatctctaagaatacgacaatcaagattgctgcccacaacattccagcgtttaaa
ccggctaaggtttttgtagaaggtgttaagagtaacgtactcataaaataa
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