Acidovorax sacchari: AVXHC19_02280
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Entry
AVXHC19_02280 CDS
T10802
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
asah Acidovorax sacchari
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
Mg_chelatase
HTH_50
AAA_3
FleQ
AAA_16
TIP39
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
BFO53425
LinkDB
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Position
complement(240064..241440)
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AA seq
458 aa
AA seq
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MARILAVDDDAAFRESLVETLQGLGHEVHEAASGDEALQQAGRHRYAAIFLDHRMPGMDG
LETLAALAARVPELPPVVVLTAYASGSGTIEAMRLGAFDHLTKPVGRAAVIEVLERALRS
RAEADATPPIPAAQSGADEADGELIGVSEAMREVHKRIGLAAASEAPVLVQGETGTGKEL
VARALHRHSARSAGPFVALNCAAIPKELLESELFGHVKGAFTGAATDRPGCFRAADGGVL
LLDEIGDMAPDVQAKLLRALQEGEVTPLGSHRPVKVDVRVVAATHRDLAAAVREGRFRED
LRYRLDVLQIALPPLRERLADIVPLAEHFLRRAAAPQPAKRLAPDAARALLAHGWPGNVR
ELRNAMERVQALQRGPVVGAADLDLGPSTGSAAMAGSASGDLPQDWLEIPLPEAVERLER
LLIAHALEQARGNRSLAARRLGIHRQLLYSKLAQYGME
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcatcctagccgtcgatgacgacgcggccttccgcgaatcgctggtcgaaacc
ctgcagggcctggggcacgaggtgcacgaggccgcgagcggcgacgaagcgctgcagcag
gccggacgccaccgctacgccgccatcttcctggaccaccgcatgcccggcatggacggg
ctggaaaccctggccgcgctcgctgcccgcgtgcccgagttgcccccggtggtggtgctc
accgcctacgccagcggctccggcaccatcgaggcgatgcgcctcggcgccttcgaccac
ctgaccaagccggtgggccgcgccgcggtgatcgaggtgctggagcgcgccctgcgctcc
cgcgccgaagcggatgccaccccacccatcccggcggcgcagtccggcgcggacgaggcg
gacggcgagctcatcggcgtgagcgaggccatgcgcgaagtccacaagcgcatcggcctg
gccgccgcgagcgaggcaccggtgctggtgcagggcgagaccggcacgggcaaggagctg
gtggcgcgcgcgctgcaccggcactcggcccgcagcgccggcccgttcgtggcgctcaat
tgcgcggccatcccgaaggaactgctggaaagcgagcttttcggccacgtgaaaggcgcc
ttcaccggcgccgccaccgaccggcccgggtgctttcgcgcggccgatggcggcgtgctg
ctgctcgacgagatcggcgacatggcgccggacgtgcaggccaagctgctgcgcgcgctg
caggaaggcgaggtcacgcccctgggcagccaccggccggtgaaagtggatgtgcgcgtg
gtggccgccacgcaccgcgacctggccgccgccgtgcgcgaggggcgcttccgcgaggac
ctgcgctaccggctcgacgtgctgcagatcgccctgcccccgctgcgcgagcggctggcc
gacatcgtgccgctggccgagcattttctgcgccgcgccgcggcaccgcagcctgccaag
cgcctggcgcctgatgccgcgcgtgccctgctcgcccatggctggccgggcaacgtgcgc
gaactgcgcaacgccatggagcgcgtgcaggccctgcagcgcggccccgtggtgggcgcg
gccgacctcgacctgggcccctccacgggctcggcggcaatggcgggctccgccagcggc
gacctgccccaggactggctcgaaattccgttgcccgaggccgtggagcggctggagcgg
ctgttgatcgcccatgcgctcgagcaggcccgcggcaaccgctcgctcgccgcccggcgc
ctgggcatccaccggcagctgctctacagcaagctggcccagtacggcatggaatga
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