Acidovorax sacchari: AVXHC19_02410
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Entry
AVXHC19_02410 CDS
T10802
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
asah Acidovorax sacchari
Pathway
asah03420
Nucleotide excision repair
Brite
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AVXHC19_02410
Transcription machinery [BR:
asah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AVXHC19_02410
Chromosome and associated proteins [BR:
asah03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AVXHC19_02410
DNA repair and recombination proteins [BR:
asah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AVXHC19_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFO53438
LinkDB
All DBs
Position
255222..257582
Genome browser
AA seq
786 aa
AA seq
DB search
MQTATQPATEPADPGAPGAESAQPWSYTIAVRELCEFTAKQGDLDLRFTPAPTAREGMAG
HAAVAARRAAEAPGYEAEVPLEGVCGLLRVRGRADGFDAAAGRVDEVKTFKGRLDRQPAA
HRALHWAQARVYGWLLCVSRGLPGLTVSLVYLDVGTQKETVLSEDWTAPALRAHFEALCG
RFVDWAAQEVAHRAARDAALRRLAFPFAGGFRAGQRPLAEAVYRTAVAGRCLLAQAPTGI
GKTVGTLFPLLKAAPGAGIDKVFFLAAKTSGRQVALDALARIAVPLPLPVRVLELVAREK
SCEYPGSACHGDACPLARGFYDRLPAARADALRPPEGGAPAPLDQARVRDAALRHGVCPY
YLGQELARWADVVVGDYHYYFDMGGLLHGLAQASQWRVALLVDEAHNLVERGRRMYSAEL
LPDSLFQARRSATAATVPAVKKALDRVRRCWVALDREQPVDYAVLEAFPGKLLAALQQCS
VTLGEHFAEHPEQMDAALQAFHLEVLQLLRMTELLDAHSIVDVSRPAQGAAGSSVVCVRN
LVPAPFLGPRLQAAQSGTLFSATLQPMDYYADLLGLPQDHVRTDVASPFRAAQLQVHIAR
HISTRYAHRAASVQPIADLMAGQFADRPGNYLAFFSSYDYLQQVAEVFAQRHPGVPHWCQ
SRRMQEAGQRAFLERFTEQGRGIGFAVLGGAFAEGIDLPGRRLIGAFLSTLGLPQVNPVN
EQVRERMDRLFGAGYDYTYLYPGLQKVVQAAGRVIRTPEDEGVVYLIDDRFGRAQVRRLL
PAWWRV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggcaacgcaaccggccacggagcccgcggaccctggcgcgcccggcgcggag
agtgcgcagccgtggagctacaccatcgccgtgcgcgagctgtgcgagttcaccgccaag
cagggcgacctcgacctgcgcttcaccccggcgcccacggcgcgggagggcatggcgggc
catgccgcggtggcggcccggcgggcggccgaggccccgggctacgaggccgaggtgccg
ctggaaggtgtgtgcgggctgctgcgcgtgcggggccgcgccgacggattcgatgccgcg
gcgggccgcgtggacgaggtcaagaccttcaagggccggctcgaccgccagcccgccgcc
caccgtgcgctgcactgggcgcaggcccgggtgtacggatggctgctgtgcgtctcgcgc
ggcctgccggggctcaccgtctctctggtgtacctggacgtcggcacccagaaggaaacc
gtgctgtccgaagactggacggcgccggcgctgcgggcgcatttcgaggcgctgtgcggc
cgcttcgtggactgggccgcgcaggaggtggcccaccgggcggcgcgcgacgctgcgctg
cgccgcctggcctttccgttcgcggggggcttccgcgcaggccagcggcccctggccgaa
gccgtgtaccggaccgccgttgccggcagatgcctgctcgcgcaggcacccacgggcatc
ggcaagacggtgggcacgctgttcccgctgctcaaggccgcgccgggcgcgggcatcgac
aaggtgttcttcctcgcggccaagacctccgggcggcaggtcgccctggacgcgctcgcc
cgcatcgcggtgcctctgcccctgcccgtgcgcgtgctggaactggtggcgcgcgagaag
tcctgcgaatacccgggcagcgcctgccacggcgacgcctgcccgctcgcgcgcggcttc
tacgaccggctgccggccgcgcgggccgatgcgctgcgcccgccggagggcggggcgccg
gcaccgctggaccaggcccgcgtgcgcgatgccgccctgcgccacggggtgtgtccctac
tacctgggccaggagctggcgcgctgggccgacgtggtggtgggtgattaccactactac
ttcgacatgggcggcctgctgcacggcctggcgcaggccagccagtggcgcgtggccctg
ctggtggacgaagcgcacaacctggtggagcgcggccggcgcatgtacagcgcggaactg
ctgccggattcgctcttccaggcccgccgctcggccaccgccgccaccgtgccggccgtg
aagaaagccctggaccgcgtgcggcgctgctgggtggcgctcgacagggagcagccggtc
gattacgccgtgctggaggccttccccggcaagctgctcgcggcgctgcagcagtgctcg
gtcacgctgggcgagcacttcgccgagcatccggagcagatggacgccgcgctgcaggcc
ttccacctggaagtgctgcagctgctgcgcatgaccgaactgctggatgcgcattccatc
gtggacgtgagccgccctgcgcagggcgccgccggcagttccgtggtctgcgtgcgcaac
ctggtgcccgcgccgttcctggggccgcgcctgcaggccgcgcagtcgggcacgctgttt
tccgccacgctgcagcccatggactactacgccgacctgctgggcctgccgcaggaccat
gtccgcaccgacgtggcctcgcccttccgcgcggcgcagctgcaggtgcatatcgcgcgc
cacatctccacgcgctatgcccatcgcgcggcctcggtgcagcccatcgccgacctcatg
gcggggcagttcgcggaccggcccggcaactacctggcctttttcagcagctacgactac
ctgcagcaggtggcggaggtgttcgcgcagcgccatcccggcgtgccgcactggtgccag
tcgcgccgcatgcaggaggccgggcagcgcgcgttcctggagcgcttcaccgagcagggc
cggggcatcggcttcgcggtgctgggcggcgccttcgccgagggcatcgacctgcccggc
cgccggctgatcggggctttcctctccacgctggggctgccgcaggtgaacccggtgaac
gagcaggtgcgagagcgcatggaccggctcttcggggccggctacgactacacctacctc
tacccgggcctgcagaaggtcgtgcaggccgcgggccgggtgatccgcacgcccgaggac
gagggcgtggtgtacctcatcgatgaccgcttcgggcgcgcgcaggtgcggcggctgctg
cctgcgtggtggcgtgtctga
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