Acidovorax sacchari: AVXHC19_06230
Help
Entry
AVXHC19_06230 CDS
T10802
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asah Acidovorax sacchari
Pathway
asah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AVXHC19_06230 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asah03021
]
AVXHC19_06230 (rpoA)
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_06230 (rpoA)
Enzymes [BR:
asah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AVXHC19_06230 (rpoA)
Transcription machinery [BR:
asah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AVXHC19_06230 (rpoA)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AVXHC19_06230 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BFO53820
LinkDB
All DBs
Position
652350..653342
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIAHLSQGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDT
PAGPRGSATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaagacgatcaacgtcgagcagctcggacacaaccgc
gccaaggtcgcgctggagcccttcgagcgcggttacgggcacacgctcggcaacgccatc
cggcgcgtgctgctgtcgtccatggtgggttacgcagcaacggaagtgacgatcgccggc
gtgctccatgagtactcgtccatcgacggcgttcaggaagatgtcgtgaacatcctgctg
aacctgaagggcgtcgtgttcaagctccacaaccgcgacgaggtcacgctgagcctgcgc
aaggatggcgagggcgtggtcaccgcgcgcgacatccagacgccgcacgacgtggaaatc
gtcaatcccgaccacgtgatcgcccacctgtcgcaaggcggcaagctggacatgcagatc
aaggtggagaagggccgcggctacgtgccgggcaacctgcgccgctatgccgacgaatcg
accaagtcgatcggccgcatcgtgctggacgcctccttctcgcccgtcaagcgtgtgagc
tacacggtggagagcgcccgcgtcgagcagcgcaccgacctggacaagctggtggtcgag
atcgagaccaatggtgctatcaccgcggaagacgccgtgcgcgcctccgccaagatcctg
gtcgagcagctcgcggtcttcgcacagctcgagggcggtgaactggctgcgttcgacacg
ccggccggcccgcgtggcagcgccacgttcgatccgatcctgctgcgccccgtggacgag
ctcgaactcaccgtgcgctcggccaactgcctgaaggccgagaacatctactacatcggc
gacctgatccagcgtaccgagaacgagttgctcaagaccccgaacctgggtcgcaagtcg
ctcaacgaaatcaaggaagtgctggcttcgcgcggcttgacgctgggcatgaagctcgag
aactggcccccggccggcctcgacaagcgctga
DBGET
integrated database retrieval system
