KEGG   Acidovorax sacchari: AVXHC19_06880
Entry
AVXHC19_06880     CDS       T10802                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
asah  Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:asah00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:asah02048]
    AVXHC19_06880
Enzymes [BR:asah01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AVXHC19_06880
Prokaryotic defense system [BR:asah02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AVXHC19_06880
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD RecX_HTH1 HSDR_N_2
Other DBs
NCBI-ProteinID: BFO53885
LinkDB
Position
729294..732422
AA seq 1042 aa
MPTVPPPSPRSERRTQNRVVALFTDPARPDGLGYRHLGDWSKRPDATTRNRPIEAALLRD
NLTARGYSPAHIAAALQKLETAADSTGITLYQANLRTYQLLRYGVPVQVAPGKPNETVHL
IDWEYPERNDFALAEEVTLKGGHERRPDIVLYLNGLAVVVIELKRSSVEVADGVRQLITN
QEEIFNKGFFSTVQLVLAGSDSQGLRYGTTGTPEQFFVEWKDEAPAEAGAPAEEGALLDR
PLAQLCNKARLLDLMRHFVIFDGGQKKVPRQHQYFGVKAAQLRVAQQEGGVIWHTQGSGK
SILMVLLAKWLLEHDAQARILVVTDRDELDKQIEGVMKNAGVIGTDAPSPRISSRADFVQ
KLGAANPRLLCALIHKFDAADLKGEPPAVQGRFYVFVDECHRTQGGDMNKQMKRWLANAI
FIGFTGTPLLRKDKLMTRDVFGTYIHTYKFHQAVADKVVLDLKYEARDVPQRLTSQRAID
QWFEQKTRGLNNFQKSVLRRRWATMEELMSAEERKARIAASVIHDFAVKPRLNNDRGTAI
LVAASIYDACHYYRIFQTKPFGQYCGIVTSYEPNHNAISREPKDSDERYKFDTYTKHVLG
KNQTTKQYEDEVKRRFKEEPANLKLLIVVSKLLTGFDAPSCSYIYLDNELRDHNLFQAIC
RTNRLDGDDKDYGHIVDFKELFGDVQQAISVYSSDELDIDEGSGGENNVHLKDWLAEGRH
QLDQAREALHYLCEPVPLPREVEQFLHYFCGDAAEPDALLKTEALRISFYKAVAIFVRAF
GALAQHLGEAGYSEAEAATLQRELDFYTFTRASIKRHSGEELDIKPYEADMRHLINTYIQ
ADAAEDLGELGEMSLTELIIETGIHDAIARKLNAKGKLSRNAIAEGIINNVRKTIIRDQL
TDPRFYEQMSKLLDDLIRQSRADAAAYEEFLRKAEALVRQLGAKRGEDGVPAALHGRHEA
AVIYNNLGSLPSATFKYPTADDDKAALALRIDLTVRENAPAGWYGDDAREAQVVNALFPI
LERDRTATEAVFEIVKNQPGYQ
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgcccaccgtaccgcctccatcgccgcgttccgaacgccgcacgcagaaccgcgtggtg
gcgctgttcaccgatccggcacgacctgacggcctcggctaccgccacctcggcgactgg
agcaagcgccccgacgccaccacccgcaaccgccccatcgaagcggcgctgctgcgcgac
aacctcacggcccgcggctactcgcctgctcacatcgccgccgcgctgcagaagctggaa
accgccgccgacagcaccggcatcacgctctaccaggccaacctgcgcacctatcagttg
ctgcgctacggcgtgccagtgcaggtggcgcccggcaaaccgaacgagacggtgcacctg
atcgattgggagtaccccgagcgcaacgacttcgcgctggccgaagaggtgacgctgaag
ggcggccacgagcgccggcccgacatcgtgctctacctcaacggcttggccgtcgtggtg
atcgagctgaagcgcagctcggtggaggtggccgacggcgtgcgccagctcatcaccaac
caggaagagatcttcaacaagggcttcttcagcaccgtgcaactggtgctggcgggcagc
gactcgcaagggctgcgctacggcaccaccggcacgccggagcagttctttgtggagtgg
aaggacgaggcgcccgccgaagccggcgcccccgcggaggaaggcgcgttgctcgaccgg
cccttggcccagttgtgcaacaaggcgcggctgctcgacctgatgcgccacttcgtgatc
ttcgatggcgggcagaagaaggtgccacgccagcaccagtacttcggcgtgaaggccgcc
cagttgcgcgttgcacagcaggaaggcggcgtgatctggcacacccagggcagcggcaag
agcattctgatggtgctgctggccaagtggctgctggagcacgatgcgcaggcgcgcatc
ctcgtcgtcaccgaccgcgacgagctggacaagcagatcgaaggcgtgatgaagaacgcc
ggcgtgatcggcaccgacgcgccctcgccccgcatcagctcgcgggccgacttcgtgcag
aagctgggcgcggccaacccgcgcctgttgtgcgcgctgatccacaagttcgacgcggcc
gatctgaagggcgagccccccgccgtgcagggccgcttctacgtgttcgtggacgaatgc
caccgcacccagggcggcgacatgaacaagcagatgaagcgctggctggccaatgccatc
ttcatcggcttcaccggcacgccgctgctgcgcaaagacaagctgatgacgcgcgacgtg
ttcggcacctatatccacacctacaagttccaccaggcagtggccgacaaggtggtgctc
gacctgaagtacgaggcccgcgacgtgccgcagcggctgacctcgcagcgcgccatcgac
cagtggttcgagcagaagacgcgggggctcaacaacttccagaaatcggtgctgcgtcgg
cggtgggccacgatggaagagctgatgagcgccgaggagcgcaaggcgcgcatcgcggcc
agcgtcatccacgacttcgccgtgaagccgcggctgaacaacgaccgcggcacggccatc
ctggtggccgcgagcatctacgacgcctgccactactaccgcatcttccagaccaagccc
ttcggccagtactgcggcatcgtcacttcctacgagccgaaccacaacgccatctcgcgt
gagccgaaagacagcgacgaacgctacaagttcgacacctacaccaagcacgtgctgggc
aagaaccagacgacgaagcagtacgaagacgaggtaaagcgccgcttcaaggaggaaccg
gccaacctgaaactgctgatcgtggtgagcaagctgctcaccggcttcgacgcaccgagt
tgcagctacatctacctcgacaacgaactgcgcgatcacaacctgttccaggccatctgc
cgcaccaaccggctggatggcgatgacaaggactacggccacatcgtcgacttcaaggag
ctgttcggtgacgtgcagcaggccatctcggtctacagctccgacgagctggacatcgac
gagggcagcggcggcgagaacaacgtgcacctgaaggactggctggctgaagggcgccac
cagctcgaccaggcccgcgaggcgctgcactacctgtgcgagccggtgccgctgccgcgc
gaagtggagcagttcctgcactatttctgcggcgatgcggccgagcccgatgccttgctc
aagaccgaggcgctacgcatctcgttctacaaggcggtggcgatcttcgtgcgtgccttt
ggcgcgctggcgcagcatctgggcgaagcgggttactcggaagccgaagcggccacgctg
cagcgcgagctggacttctacaccttcacgcgcgcgagcatcaaacgccactcaggcgaa
gagctggacatcaagccctacgaggcggacatgcgccacctcatcaacacctacatccag
gccgatgcggccgaagacctgggtgagctgggcgagatgtcgctcaccgagctgatcatc
gagacgggcatccatgatgcgatcgcgagaaagctcaacgcgaagggcaagctgtcgagg
aacgcgattgccgaaggcatcatcaacaacgtccgcaagacgatcatccgcgaccaactg
accgacccgcgcttctacgagcagatgtcgaagctgctggacgatctgatccggcagagc
cgggccgatgcggccgcctacgaagagtttctgcgcaaggccgaggccctggtgcggcag
ctcggcgcgaagcgcggagaagacggcgtgccggcggctttgcacggccggcatgaagcg
gcggtgatctacaacaacctcggctcgctgccatcggccaccttcaagtacccgacggcc
gacgacgacaaggcagcattggcgctccggatcgacctgaccgtgcgcgagaacgccccg
gcgggttggtatggcgacgacgcccgcgaggcgcaggtggtgaatgcactgttccccatc
ctggagcgcgaccgcacggccaccgaggcggtattcgagatcgtcaagaaccagccgggc
taccaatga

DBGET integrated database retrieval system