Acidovorax sacchari: AVXHC19_07710
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Entry
AVXHC19_07710 CDS
T10802
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
asah Acidovorax sacchari
Pathway
asah00300
Lysine biosynthesis
asah00470
D-Amino acid metabolism
asah01100
Metabolic pathways
asah01110
Biosynthesis of secondary metabolites
asah01120
Microbial metabolism in diverse environments
asah01230
Biosynthesis of amino acids
Module
asah_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AVXHC19_07710 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AVXHC19_07710 (dapF)
Enzymes [BR:
asah01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AVXHC19_07710 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BFO53968
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Position
838583..839461
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AA seq
292 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETQGRLGLTPAQYRYLADRHFGVGADQILTVRPSPAEGIDF
EYVIHNADGGEVEQCGNGARCFARYVRDKGLTDRDTIRVQTLAGVIAPRLTPDGRVTVDM
GRPRFAPSEVPFDASGLAPAARGAGQTWPLSLGAAADAQVVDVAVVSMGNPHAVQLVADV
DTAPVARTGPLIEGHARFPQRVNAGYLQIEDRARVRLRVYERGAGETLACGTGACAAVAA
GIRLGLLDTRVDVRTRGGLLTIAWSGDPSESVFMTGPATTVFEGQIDIPDAP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgcttcaccaaaatgcagggtgccggcaacgatttcgtcgtgctcgacgaa
acgcaggggcgcctgggcctcacgcccgcgcagtaccgctacctcgccgaccgccacttc
ggggtcggcgccgaccagatcctcaccgtgcgcccgtcgccggccgaaggcatcgatttc
gaatacgtcatccacaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgcttcgcccgctacgtgcgcgacaagggcctcaccgaccgggacaccatccgcgtgcag
accctggccggcgtgatcgccccgcgcctgacaccggacggccgcgtcaccgtggacatg
ggccgcccgcgcttcgccccctccgaagtgcctttcgacgcctcgggcctcgcccccgcg
gcccgcggggcggggcagacgtggcccctgtcgctcggcgctgctgccgatgcgcaggtg
gtggatgtggcggtggtctccatgggcaacccgcacgccgtccagctggtcgcggacgtg
gacacggcgccggtggcgcgtaccggcccgctcatcgagggccacgcgcgctttccgcag
cgcgtgaacgcgggctacctgcagatcgaggaccgcgcccgcgtgcgcctgcgcgtgtac
gaacgcggcgccggcgaaaccctggcctgcggcacgggcgcctgcgcggccgtggccgcc
ggcatccgcctgggcctgctggacacgcgcgtcgatgtccgcacgcgcggcggcctgctc
accatcgcctggagcggcgacccctccgagtccgtcttcatgaccggcccggcgaccacc
gtcttcgaaggccagatcgacattcccgacgcaccatga
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