Acidovorax sacchari: AVXHC19_08110
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Entry
AVXHC19_08110 CDS
T10802
Symbol
xynR
Name
(GenBank) DNA-binding transcriptional repressor XynR
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asah03000
]
AVXHC19_08110 (xynR)
Transcription factors [BR:
asah03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AVXHC19_08110 (xynR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Rrf2
HTH_26
MarR_2
MarR
Cullin
HTH_11
Rio2_N
HTH_52
DUF2582
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BFO54008
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Position
886843..887709
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AA seq
288 aa
AA seq
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MSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLLGTLEHEKYVRSDPHAY
GQYQLTLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLAVIDGHQMRVVFCTMPY
SPYAIRPSSLGRRYDLIPSALGRAYLAYCTRAERRILVEAANTHGEPHQKITDMWALRRI
VRETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFASQMDDRMLKRFLSLVQS
TASRIGEEAAQSSQPSGMPMPPQTAGVLAAPQPVAYAGAVSNAHPVAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgaagtccgctccgtgcaacgtgcgctgctgatcctgcgcgtcatgaacgag
cgctccacctggagcttgcaggaactgcaccagcgcacgggcctcgccaaatccacgctg
caccgcctgctgggcacgctggagcacgagaaatacgtgcgcagcgatccccatgcctac
gggcagtaccagctgacgctggccgtgagcaacctcagcagcggcgtgaacgagaaactg
cgcctggccgagctcgccgcgccgctgatgatcaccgccacgcggcagatcaagtggccg
ctgtcgctcgccgtgatcgacgggcaccagatgcgcgtggtcttctgcaccatgccctac
agcccctatgccatccgcccctccagcctgggccggcgctacgacctgatcccctcggcg
ctgggccgcgcctacctcgcatactgcacccgcgccgagcgccgcatcctcgtggaggcc
gccaacacccatggcgagccgcaccagaagatcaccgacatgtgggcgctgcgccggatc
gtgcgggaaacgcgccgccagggctatgccatccgctatgcgcgcaacaactccgagagc
acggctttcgcggtgccggtgttcggcgggggcgtgctgcgcggcgcgctggtgtattcc
accttcgcgagccagatggacgaccgcatgctcaagcgtttcctctcgctcgtgcagtcc
accgcatcgcgcatcggcgaggaagccgcgcagtcgtcgcagccctccggcatgccgatg
ccgccgcagacggctggcgtcctggctgcaccgcagccggtggcgtatgcgggtgccgtg
tcgaacgcgcaccccgtggcggcctga
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