Acidovorax sacchari: AVXHC19_12620
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Entry
AVXHC19_12620 CDS
T10802
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asah03016
]
AVXHC19_12620 (truA)
Enzymes [BR:
asah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AVXHC19_12620 (truA)
Transfer RNA biogenesis [BR:
asah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVXHC19_12620 (truA)
Prokaryotic type
AVXHC19_12620 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
BFO54459
LinkDB
All DBs
Position
complement(1398492..1399322)
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AA seq
276 aa
AA seq
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MALGVSYNGSAYRGWQSQPGGTTVQDRLEAALARFATHEVSTICAGRTDAGVHGLMQVVH
FDTPLERTPFSWVRGTNTFLPPDIAVQWARPVPEAFHSRASATARRYAYVLLQSPVRPSV
ESGRVGWVFHALDGDAMRAAARHLLGEHDFTSFRASACQAKSPVKTLRRIEITQRGTGGV
PAGQASGDRGDVPTCYWRFEFEGNAFLHHMVRNIMGCLVAVGQGQHPADWMHAVLQARSR
DAAAPTFSPDGLYFLGPVYDPAWGLPDRTAAYDWLP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgggcgtcagctacaacggttccgcctaccgcggctggcagagccagcccggt
gggacgaccgtgcaggaccgcctggaggcggccctcgcgcgcttcgccacgcacgaggtt
tccacgatctgcgccgggcgcacggatgccggggtgcacggcctcatgcaggtggtgcac
ttcgacacgccgctggagcgaacgccgttctcctgggtgcgcggcaccaacaccttcctg
ccgccggacatcgccgtgcaatgggcgcgccccgtgccggaagccttccattcgcgcgcc
agcgccacggcccgccggtacgcctacgtactgctgcagtcgcccgtgcgcccgagcgtg
gagtcgggacgggtgggctgggtcttccacgccctggacggggacgccatgcgcgccgcg
gcacggcacctgcttggcgaacacgacttcacctccttccgcgcctccgcatgccaggcg
aagtcacccgtcaagacgctgcgccgcatcgagatcacgcagcgcggcacgggcggggtg
ccggcaggccaggcctcgggcgaccgtggcgacgtacccacctgctactggcgattcgag
ttcgagggcaatgccttcctgcaccacatggtgcgcaacatcatgggatgcctcgtggcg
gtcggccagggacagcacccggcggactggatgcacgccgtgctgcaggcgcgctcgcgg
gacgcggcggcgcccaccttctccccggacggcctgtactttctcggcccggtctacgat
ccggcctggggactgcccgatcgcaccgctgcgtatgattggctgccctga
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