Acidovorax sacchari: AVXHC19_13980
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Entry
AVXHC19_13980 CDS
T10802
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_13980
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVXHC19_13980
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AVXHC19_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BFO54595
LinkDB
All DBs
Position
complement(1536375..1539548)
Genome browser
AA seq
1057 aa
AA seq
DB search
MNNIEFVSAGAGSGKTYKLTETLAQALESATARPHAILATTFTVKAATELRERARSWLLE
KGRVDLATAIGQARLGTVNSVCGQMLKQFCFELGLSPDQTVLSEGQTKRLLETSLAETLD
PVGQSEFVQLTRRFGIEQEDWAKTVKDVVKAALDNDIAPAALRPMGPRNADQMLANWPAP
VAGPDPTAVLAAAVATARQEVATYVDAQNAAGAKVAKNLQEGLGDLQKLERAFREDRWSW
PDWIGAAGIDAGAKVKHFLEPVKAAAQAHESHPAFHANVRRYLELVFNLAADALDAYAEA
KKTLGAVDFSDQEVLLLRAIRENASVREVLADELDLVMVDEFQDTSPLQLALFVEFAKLA
KRSLWVGDPKQAIYGFRGTDASLISGIIGAIPGWGGSIGAPLTTSRRSTPTLVSLTNAVF
GGAFQPELAPQDVQLQPARKDLPNQPSLLNWNFESSKNGTDYLALGQAIAELLASGMQVE
DKATKSLRAVQPGDIGVLCRKHDQVDLAVTSLTQWGIPSASPRAGLLGTAEAIFVLACLR
RMHDVSDTVASALVLTLADGIPVDAWLADRLDYLDKPDVKSHEWKTHGESAHPLLSRFEE
LRPAFTSLTPLEALRLAASESHVAQLVAQWSSSPHEAHNRLANVEALVELGKTYEDECIA
AKRPATVSGLLRWLDETAEAEDDGRAASADNAVTVLTYHGSKGLEWPVVVLSALGETARS
ALWNVRARTEGAFDPQMPLGNRFIHCWPKTWGKRAAPQAAVNAEASATGVSMQKDAEAEN
KRLLYVGLTRARDVNVLVSFVRKSVPVRSWVDELPGASQILFGPTGETVLADSRRCSRTS
EDWNKDECAAEPPVRAPQDRHWFTRRPLASAVPLWYRPSSAVGGQFTIAETANIGIRIAL
TGKPDMADLGTAVHHCIARAGARGAVEQADVSSILSNWGVGNTVDNAAVVAQLNAFRAWC
AERWPGCPTFVEVPIEANRPDGTRVRGRIDLLVQSSNGWILVDHKSNPGGADRNEQMTQE
HGPQLAAYAEALVAATGTPVAEQWLYLPVAARALRLA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcgaatttgtgagcgcgggcgctggtagcggcaagacctacaagctgacc
gagaccctcgctcaggctctagagtctgctactgcaaggcctcatgccattttggcaacg
acgtttacggtgaaggccgccacggagttgcgcgaacgcgctcggtcatggttactggag
aaaggccgtgttgaccttgccacggctatcggacaggctaggctgggaacggtcaacagc
gtctgcggccagatgctcaagcagttttgctttgagttggggctgtcccccgaccagacc
gttctcagtgaagggcagacaaaacggctgctcgaaacatcacttgctgagactctggac
cctgtgggccagtccgaatttgttcaactcacgcgcagatttggaattgaacaggaagac
tgggccaagaccgtcaaggacgtggtcaaggcagccctcgacaacgacattgcgcccgca
gcgctacggccgatgggaccgcgcaacgccgaccaaatgcttgcgaactggcctgccccg
gtcgcaggtccagacccgacggcagttttagccgcagcagtggcaaccgcgcgccaagag
gtggccacctatgtcgacgcgcagaatgcggccggcgccaaagtggccaagaacctccaa
gaaggactgggtgacttgcaaaagctcgagcgtgcgttccgcgaggaccgatggtcgtgg
cctgactggataggtgcagcaggtatcgacgccggtgccaaggtcaagcactttctcgag
ccagtgaaagccgcggctcaggcgcacgaatctcatcccgccttccatgccaacgtgcgg
cggtatttggagctggtattcaatctagcagccgatgccctggatgcctatgcggaggct
aagaagaccctgggcgccgtggacttcagcgaccaggaagtgctgttgctgcgggcgatt
cgagaaaacgccagcgtccgcgaggtgttggccgacgaactcgacttggtgatggtcgat
gagttccaggacacaagccctctccagctcgcactgttcgtggaattcgccaagctggcc
aaacgttcactctgggttggcgaccccaagcaagcgatttatggctttcgcgggaccgat
gccagccttatctctggaatcatcggagcgattccgggctggggcggctctattggtgcc
cccctgaccacatcgcgtcggtccaccccaaccttggtctcgctcacgaatgcagtgttc
ggcggtgcctttcagcccgaattggcgccacaggacgttcagttgcaacccgctcgcaag
gacctccccaaccaaccctcgcttttgaactggaactttgagagcagcaagaacggcacg
gactacctggcactgggccaggccatagcggagctactagcctccgggatgcaggtggaa
gacaaggcgaccaaatctcttcgggcagtccagccaggtgacatcggggtcctctgccgg
aaacacgaccaagtggacttggccgtcacttcgctcacccagtggggcattccttctgca
agccctcgcgccggcctgctgggaacagccgaggccatttttgtcctggcttgtctgcga
cgcatgcacgatgtcagcgacacggttgcatccgctcttgtgctgacgttggcagatggc
atcccggtagacgcatggctcgcggaccgcctcgactatctagacaagcccgatgtcaaa
tctcatgagtggaagacacacggcgaatctgcacatccgctgctttcacgtttcgaagaa
ctacgcccggccttcacctccttgactcctctggaagctctacgcctggccgcttcagag
tcacacgtcgcgcagcttgtcgcccaatggtctagctctccgcatgaggcccacaaccga
ttggccaacgttgaagcactggtcgaactgggcaaaacctacgaagacgaatgcatcgcg
gccaagcgacctgcgacggtcagtgggctactcaggtggctcgatgaaaccgcggaagcg
gaggacgatggtcgggccgcgtcagcagacaacgcggtcacggtcctcacctaccatggg
tcaaagggcttggaatggccggtcgttgtactttctgcgcttggcgaaactgccagaagt
gcgctttggaatgtgcgggcacgcacggaaggcgcctttgacccgcagatgccactgggc
aatcgcttcattcactgctggcccaagacttggggtaagcgcgcggccccacaagccgct
gtcaacgcggaagcaagtgcgacgggagtctccatgcaaaaagacgccgaggcggaaaac
aagcgcctgctctacgttgggttgacccgtgccagagatgtgaacgtcctggtgtcattc
gtcaggaagtctgtgccagttcgcagttgggtggatgagctaccgggcgcaagtcagatt
ctgtttggtcctaccggggagacggtccttgctgatagtcggcggtgttcaagaacatcc
gaggactggaacaaagacgaatgcgcggccgagcctccagtgcgagcaccgcaagaccgt
cattggtttacccgtcgacctctcgcatcggcagtgcccttgtggtaccgaccgagtagc
gccgttggcgggcaattcaccattgcggagaccgcaaacattggcattcgtattgcacta
acaggcaagcccgacatggccgacctggggacagcagtccatcactgcattgctcgggct
ggtgcgcgaggagcggtggagcaggccgatgtcagcagcattctcagcaattggggcgta
ggcaacaccgtcgacaacgccgcagttgtcgcgcagctcaacgccttccgtgcgtggtgc
gccgagcggtggccaggatgtcccaccttcgtcgaggttccgattgaagcaaatcgccca
gatggaacgcgcgtgaggggccgtatcgacttgctggtgcagtcctccaatggatggatt
cttgtagaccacaaatccaaccccggtggcgcagaccggaatgagcagatgacccaggaa
cacggccctcaactcgctgcctatgccgaggctctggttgctgccacagggacgccggta
gcggaacagtggctatacctgccggtcgctgctcgtgcattgcgcctcgcttaa
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