Acidovorax sacchari: AVXHC19_17550
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Entry
AVXHC19_17550 CDS
T10802
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asah03009
]
AVXHC19_17550 (rimO)
Enzymes [BR:
asah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AVXHC19_17550 (rimO)
Ribosome biogenesis [BR:
asah03009
]
Prokaryotic type
ribosomal protein modification factors
AVXHC19_17550 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BFO54952
LinkDB
All DBs
Position
complement(1946584..1947975)
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AA seq
463 aa
AA seq
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MSDVLSPTKTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFID
DAVKESLDTIGEALAENGKVIVTGCLGARAGEGGGNLVREMHPSVLAVTGPHATQEVMDA
VHQNLPKPHDPFIDLVPGGFGVAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVGDVLSEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQTLGEI
AEPYGAWVRLHYVYPYPSVDEVIPFMATGRILPYLDVPFQHSHPDVLKRMKRPASGERNL
ERIQRWREACPELVIRSTFIAGFPGETEEEFQHLLDFLREAQIDRAGCFAYSDVDGAVAN
ELPGMLPMEVREERRARFMAVAEEVSIARLQRRVGATMQVLVDHAPALGRKGGRGRSYAD
APEIDGVVHLLPPEKISKQLKVGEFTRAQIVGVQGHDLVARPI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgttctctcccccacgaaaacacccaaagtcgggttcgtgagcctcggctgc
cccaaggccctcacggattccgaactcatcctcacgcagctgagcgccgagggttaccag
acttccaagaccttcgagggcgccgacctcgtcatcgtcaacacctgcggcttcatcgac
gatgccgtgaaggaaagcctcgacaccatcggcgaggcgctggccgagaacggcaaggtc
atcgtcaccggctgcctgggcgcgcgggcgggcgagggcggcggcaacctggtgcgcgag
atgcacccgagcgtgctggccgtgaccggcccgcatgccacgcaggaggtgatggacgcc
gtccaccagaacctgcccaagccgcacgacccgttcatcgacctcgtgcccggcggtttc
ggcgtggcgggcgtgaagctcacgccccggcactatgcgtacctcaagatcagcgagggc
tgcaaccaccgctgcaccttctgcatcatcccttcgatgcgcggcgacctggtctcgcgc
cccgtgggcgacgtgctgagcgaggcgaaggcgctgttcgagggcggcgtgaaggagctg
ctggtgatcagccaggacacctccgcctatggcgtggacgtgaaataccgcaccggcttc
tgggacggcaagccggtcaagacgcgcatgctggagctggtgcagacgctgggcgagatc
gccgagccctacggcgcctgggtgcgcctgcactacgtgtacccgtaccccagcgtggac
gaggtgatcccgttcatggccacgggcaggatcctgccctacctggacgtgccgttccag
cacagccaccccgacgtgctcaagcgcatgaagcggccggccagcggcgagcgcaacctg
gagcgcatccagcgctggcgcgaggcctgcccggagctggtgatccgcagcaccttcatc
gcgggcttcccgggcgagacggaagaagagttccagcatttgctcgatttcctgcgcgag
gcgcagatcgaccgggccggctgcttcgcctacagcgacgtggacggcgccgtcgccaac
gagctgcccggcatgctgccgatggaagtgcgcgaggagcgccgcgcgcgcttcatggcc
gtggccgaggaggtctccatcgcccgcctgcagcgccgcgtgggcgcgaccatgcaggtg
ctggtggaccacgccccggcgctgggccgcaaggggggccggggccgcagctatgccgat
gcgcccgagatcgacggagtggtgcacctgctgccgcccgagaagatcagcaagcagctc
aaggtgggcgaattcacgcgcgcgcagatcgtgggcgtgcagggccacgatctggtcgcc
cggccgatctga
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