Acidovorax sacchari: AVXHC19_19520
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Entry
AVXHC19_19520 CDS
T10802
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asah03016
]
AVXHC19_19520 (truB)
Enzymes [BR:
asah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AVXHC19_19520 (truB)
Transfer RNA biogenesis [BR:
asah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVXHC19_19520 (truB)
Prokaryotic type
AVXHC19_19520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BFO55149
LinkDB
All DBs
Position
2155255..2156250
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AA seq
331 aa
AA seq
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MTARAPRIRVQRRPVHGVLLLDKPLGLSSNDALQKAKWLLRAEKAGHTGTLDPLASGVLP
LCFGAATKFSQLQLDAPKTYEAVARLGVTTTTGDAEGEVTGRREVDPAQLAPERLAAVQR
QFTGPIRQVPPMHSALKKDGKALYEYARAGIAVEREARDVVIHALELSLAEDQGVPAVRM
VVTCSKGTYIRTLGEDVGAALGCGAHLTFLRRIDTGGLGVERCVTLAALEAMDEAGRMAC
VQPVETLLAGHAAVTLDHDNTARFLSGMRRRGPWPDAPAVAVFGHDPRALLGVGRVAAGE
LIPERLLSPQEIAQILESTPRAERGTLEPTL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgcgctccccgcatccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaagcccctgggcctttccagcaacgacgcgttgcagaaggccaagtggctgctg
cgcgctgaaaaagccgggcatacgggcaccctcgatccactcgccagcggcgtgctgccg
ctgtgcttcggcgcggccaccaagttcagccagctgcagctcgacgcgcccaagacctat
gaggccgtggcccggctgggtgtgaccaccaccaccggcgatgccgagggggaggtcacc
gggcgccgcgaggtggacccggcgcagcttgctcccgagcgtctggcggccgtgcaacgg
cagttcaccggcccgatccgccaggtgccgccgatgcacagcgccctcaagaaggacggc
aaggcgctctacgaatacgcccgcgcaggcatcgccgtcgagcgcgaggcgcgcgacgtg
gtcatccatgcgctggagctgtcgctggccgaagaccagggcgtacccgccgtgcgcatg
gtcgtgacctgcagcaagggcacctacatccgcacgctgggcgaggacgtgggcgccgca
ctgggctgcggtgcgcacctcaccttcctgcgccgcatcgatacgggcgggctgggcgtg
gaacgctgcgtcacgctcgccgcgctcgaagccatggacgaggccgggcggatggcctgc
gtgcagccggtggaaacgctgctcgcggggcatgcggctgtcacgctggaccatgacaat
acggcgcgattcctctccggcatgcgccgccgcggcccctggcccgacgcgcccgccgtg
gccgtgttcggccacgatccccgcgccctgctgggcgtcggccgggtggcggccggcgaa
ctcatccccgagcgtctcctgagcccccaggagatcgcacagattctggaaagcacgccg
cgggcagagcgcggcacattggaacccactctatga
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