Acidovorax sacchari: AVXHC19_20910
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Entry
AVXHC19_20910 CDS
T10802
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asah03032
]
AVXHC19_20910
03036 Chromosome and associated proteins [BR:
asah03036
]
AVXHC19_20910
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_20910
DNA replication proteins [BR:
asah03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AVXHC19_20910
Chromosome and associated proteins [BR:
asah03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AVXHC19_20910
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AVXHC19_20910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BFO55288
LinkDB
All DBs
Position
complement(2308745..2309074)
Genome browser
AA seq
109 aa
AA seq
DB search
MTRSDLVEELAARFGQLTQRDAEAAVKTILDAVGDALVRGHRIEVRGFGSFSVNRRPPRM
GRNPRSGEAVHIPEKRVPHFKPGKALREAVDRRTAEMGIGAAADPSDAA
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatcagacctcgtcgaagaacttgccgcccgcttcggccagctcacgcaacgc
gatgccgaagccgccgtcaagaccatcctggatgcagtgggcgatgcgctggtgcgcggc
caccgcatcgaggtgcgcgggttcggcagcttttcggtcaaccgccgcccgccgcgcatg
ggacgcaatccccgcagcggcgaggccgtgcacatccccgagaagcgcgttccgcatttc
aagccgggcaaggccctgcgcgaagccgtggaccgccgcaccgccgagatgggcatcggc
gccgcggccgacccgtccgatgccgcctga
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