Acidovorax sacchari: AVXHC19_20920
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Entry
AVXHC19_20920 CDS
T10802
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
asah Acidovorax sacchari
Pathway
asah03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AVXHC19_20920 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
asah03011
]
AVXHC19_20920 (rpsA)
Ribosome [BR:
asah03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AVXHC19_20920 (rpsA)
Bacteria
AVXHC19_20920 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SpuA_C
BPL_C
Motif
Other DBs
NCBI-ProteinID:
BFO55289
LinkDB
All DBs
Position
complement(2309260..2310945)
Genome browser
AA seq
561 aa
AA seq
DB search
MSESFAALFEESLQRTEMRPGEVITAEVVRVEHNFVVVNAGLKSEAYVPLEEFKNDKGEV
EVQVGDFVSVAIGSIENGYGDTILSRDTAKRLASWLALEKALESGEFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTMEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGSIVQGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWLGVSRRYPSGTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNIAPSKLVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEPGEAAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDGDPFTTFVTVNDKGQTVTGKVKTVDARGAEIDLGEDIVGYLRA
SEISRDRVEDARNVLKEGDEVTAVVVNVDRKTRNIQLSIKAKDMADEQGAMASLSQQSAR
ESAGTTSLGALLRAKLDNSDK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgccctttttgaagaatccctgcagcgcaccgaaatgcgcccg
ggcgaagtcatcaccgccgaagtcgtgcgcgtcgagcacaacttcgtcgtggtgaacgca
ggcctcaagtccgaagcctacgtgcccctcgaggaattcaagaacgacaagggcgaggtc
gaagtccaggtgggagatttcgtctccgtcgccatcggctcgatcgagaacggttacggc
gacacgatcctgtcgcgcgacaccgccaagcgcctggcctcctggctggcgctggaaaag
gccctggaatccggcgagttcgtcaccggcacgaccagcggcaaggtcaagggcggcctc
accgtcctggtcaacggcatccgcgccttcctgcccggttcgctgatcgatacgcgtccg
atcaaggatctgacgccgtacgagaacaagaccatggaattcaaggtcatcaagctcgac
cgcaagcgcaacaacgtggtgctgagccgccgcgccgtggtggaagcctccatgggcgaa
gagcgcgccaagctgatggaaaccctgaaggaaggctccatcgttcagggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggacctgggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgtgtccgccacccctccgaggtggtgcaggccggccaggaa
atcaccgccaagatcctcaagttcgacaccgagaagaaccgcgtctccctgggcctgaag
cagatgggcgacgatccctggctgggcgtgtcgcgccgctacccctcgggcacgcgcctg
ttcggcaaggtcacgaacatcgccgactacggtgcgttcgtggaactcgagcccggcatc
gaaggcctggtgcacgtttccgaaatggactggacgaacaagaacatcgctccgtccaag
ctcgtgtcgctgggtgacgaagtcgaagtcatggtcctcgagatcgacgaagacaagcgc
cgcatcagcctgggcatgaagcagtgcaaggccaacccgtggcaggagttcgcgcagaac
accaagcgcggcgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggcctggctgccggcatcgacggcctggtgcacctgtccgacctgtcctggaacgag
cccggcgaagccgccgtgcgcaactacaagaagggccaggaagtcgaggcgatcgtgctg
gccgtggacgtggaccgcgagcgcatctccctgggcatcaagcagctcgacggcgacccg
ttcacgaccttcgtgacggtgaacgacaagggccagacggtgaccggcaaggtcaagacc
gtcgacgcccgtggcgccgagatcgacctgggcgaagacatcgtgggctacctgcgcgct
tcggaaatctcccgcgaccgcgtggaagatgcccgcaacgtgctgaaggaaggcgacgaa
gtcacggccgtggtggtgaacgtggatcgcaagacccgcaacatccagctgtcgatcaag
gccaaggacatggccgacgagcaaggcgccatggcatccctgtcgcagcaatcggcccgc
gaaagcgccggcacgaccagcctgggcgccctgctgcgcgccaagctggacaactccgac
aaataa
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