Acidovorax sacchari: AVXHC19_25260
Help
Entry
AVXHC19_25260 CDS
T10802
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asah03036
]
AVXHC19_25260 (smc)
Chromosome and associated proteins [BR:
asah03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AVXHC19_25260 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BFO55723
LinkDB
All DBs
Position
2820820..2824347
Genome browser
AA seq
1175 aa
AA seq
DB search
MRLNSIKLAGFKSFAEPTHFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES
MQDVIFNGTTHRKPASRSSVELVFDNADHRAGGQWNQYAEIAVKRVLTREGNSSYFINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESRPEELRLFLEEAAGVSKYKERRRET
ENRLADTRENLTRVEDILRELNANLERLEKQAEVAARYNALQSDVTLRQHQLWFLKRADA
EAEQNRVRTEGLQAVNDLESRMADLRHVEADLETIRQAHYAAGDQVNQAQGRLYEATAEV
GKLEAEIRYVVEGRQRVEQRLAQLAEQIVQWSARKEEAEAEMENLAGAGVDAEERAEMLA
AQVEEQAMQMPDLEEALRQAQQRSEAQRASVVQVQQQIQVLAAEQRSLQEQRRQAESRHE
RLRADRNALAAPDEARLANLNGQLQEAEEAAEMAEARLAELQDSVPQLDEERRQRQQAAN
AEGARQADLSARLEALKALQEKVRTDGKLKPWLARHGLDGLQGLWSRLHIEPGWENALEA
ALRERLGALEVGRLDTVRGFLGAGGQDAPPARLAFYSAPSAAGASGTASAAARLADLLRV
PEAGLRAVLEDWLQGCQTAATLDEALDRRTQLRPGEAIYVPGGHAVSAHGVSFYAQDSEQ
SGLLARAQEIEHLEKELRAQALIHEESRTALVRAEAAYADASQRLVAARREASEAQGRRH
ELQVESLRLNQLAEQARARSEQIGADLAEVEAQLADLQERSVASEARFEELDMQLADSQE
RHAQLGDRVIEAERRLNECREQQRALERQAQEATFSRRSLEARRAELARTIDTARTQVAS
LEDERQRAQDEMGRLSSAAAQGGLQQALELKMEREKALAAQRSEYDDLTARLRASDERRL
QLERALDPLRQRITDFQLKEQAARLGLEQYTSLLADAQADLDAVARSIEEGGVRAAGLQS
EIDRLHREITALGAVNLAALDELQLARERKTFLDAQTEDLTLAMNTLEDAIRKIDAETRT
LLSGTFETVNGHFGRMFPELFGGGQARLIMTGDEILDSGVQVMAQPPGKKNQTIHLLSGG
EKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVASMSRGTQFLFISHNKI
AMEMAEQLIGVTMQEQGVSRIVAVDMESALSMAEA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcaactccatcaaactcgccggcttcaagtcgttcgccgaacccacgcacttc
gtgctcccggggcagctcgtgggcgtggtgggccccaacggctgcggcaagtccaacatc
atggacgcggtgcgatgggtactgggagagtccaaggcgagcgagctgcgcggcgaatcg
atgcaggacgtgatcttcaatggaaccacgcaccgcaagcccgccagccgctcgagcgtg
gaactggtcttcgataacgcggaccaccgggctggcgggcaatggaaccagtacgccgag
attgccgtcaagcgcgtgctcacgcgcgagggcaacagcagctatttcatcaacaaccag
cccgtgcgccgccgcgacgtgcaggacgtgttcctgggcaccggcctggggccccgcgcg
tacgccatcatcggacaggggacgatcagccgcatcatcgaatcgcgtccggaagagctg
aggcttttcctggaggaggcggcgggcgtctccaaatacaaggagcgccgccgcgagacc
gagaaccgcctggccgacacccgcgagaacctcacgcgcgtggaggacatcctgcgcgag
ctgaacgcgaacctggaacgcctggaaaagcaggcggaggtggcggcccgctataacgcc
ctgcagtcggacgtgacgctgcggcagcaccagctctggttcctcaagcgcgccgatgcg
gaagccgaacagaaccgcgttcgcacggaagggctgcaggcggtgaacgacctggaatcc
cgcatggccgacctgcgccatgtggaggcggatctggaaaccatccgccaggcccactat
gccgccggtgaccaggtcaaccaggcgcagggccggctctacgaggcgaccgcggaggtc
ggcaagctggaggcggagatccgctatgtggtggaagggcgccagcgcgtggagcagcgg
ctggcccagttggccgagcagatcgtgcaatggtcggcccgcaaggaagaggccgaggcc
gagatggaaaacctcgccggcgccggggtggatgcggaggagcgcgcggagatgctcgcc
gcccaggtcgaggaacaggcgatgcagatgcccgacctggaggaagccctgcgccaggcg
cagcaacgctccgaagcgcagcgcgcgtcggtggtacaggtgcagcagcagatccaggtg
ctggcggccgagcagcgcagcctgcaggagcagcggcggcaggcggaatcgcggcacgag
cgcctgcgtgccgatcgcaatgccctggcggcccccgacgaagcgcgcctggccaacctg
aacgggcaattgcaggaggccgaggaggccgccgaaatggcggaggcacggctggccgaa
ctgcaggacagcgttccccagctggacgaagagcgccgccagcggcagcaggccgcgaac
gccgaaggcgcccggcaggcagacctctcggcacgcctggaggcgctcaaggctctgcag
gagaaggtccgcacggacggcaagctcaagccgtggctggcccggcacgggctggacggg
ctgcagggcctgtggagccgactgcacatcgagcccggctgggagaacgcgctggaagcc
gcgctgcgcgagcgcctgggggcgctggaggtcgggcgcctggataccgtccgcggcttc
ctcggcgccggcgggcaggatgcacctcccgcccgcctggccttctacagcgcgccgtcc
gccgcgggcgcgtccggtacggcatcggccgcggcgcggctggccgacctgctgcgtgtg
ccggaggccggcctgcgtgccgtgctggaggactggctgcagggatgccagacagccgcc
acgctggacgaggcgctggaccgccggacccagctgcggccgggcgaggcgatatacgtt
cccggcgggcatgcggtcagcgcgcacggcgtgagtttctatgcgcaggattcggagcaa
tcgggcctgctcgcgcgcgcccaggaaatcgagcacctcgagaaagaactgcgggcacag
gcgctcatccacgaggaatcgcgcaccgcgctggtccgtgccgaagcggcttatgcagat
gcctcgcaacggctggtggcggcccggcgggaggccagcgaagcccagggccggcgccac
gaattgcaggtcgagagcctgcgcctgaaccagctggcggagcaggcccgggcacggagc
gagcagatcggcgccgacctggccgaggtggaggcccaactggcggaccttcaggagcgt
tcggtggcttcggaggcgcgtttcgaagaactggacatgcagctcgccgacagccaggag
cgccatgcccagctgggcgaccgcgtgatcgaggccgagcggcgcctgaacgagtgccgc
gagcagcagcgggccctggagaggcaggcgcaggaagcgactttctcccgccgcagcctg
gaagcgcggcgggccgaactggcgcgcaccatcgacaccgcgcgcacgcaggtcgcatcg
ctggaggacgagcgccagcgcgcccaggacgaaatgggccgcctgtcttccgcggcggcg
caaggcggccttcagcaggcgctggagctgaagatggagcgcgagaaggccctggccgcg
cagcgcagcgaatacgacgatctcacggcccgactgcgcgcgagtgacgagcggcggctg
cagctggagcgcgcgctcgatccgctgcgccagcgcatcaccgatttccagctcaaggag
caggcggcgcggctgggcctggagcaatacaccagcctgctcgcggatgcacaggccgac
ctggacgccgtggcgcgctccatcgaagagggcggcgtgcgagccgccggcctgcaatcc
gagatcgaccggctccaccgcgagatcaccgccctgggcgcggtcaacctcgccgcgctg
gacgagttgcagctggcccgcgagcgcaagaccttcctcgacgcgcagaccgaagacctg
accctggcgatgaacacgctcgaggacgcgatccgcaagatcgacgccgagacgcgcacg
ctgctgtccggcaccttcgagaccgtgaacggccatttcggccgcatgttccccgaactg
ttcggcggcgggcaggcgcggctcatcatgaccggtgacgaaatcctcgactccggcgtg
caggtgatggcgcagcctccgggcaagaagaaccagaccatccacctgctttccggcgga
gagaaggcgctgacggccatcgcgctggtcttcgccatcttccagctcaacccggcgccg
ttctgcctgctggacgaggtggacgcgccgctggacgacgcgaacaccgaacgctatgcc
aaactcgtcgcgagcatgagccgcggcacgcagttccttttcatcagccacaacaagatc
gccatggaaatggccgagcaactcatcggcgtgacgatgcaggagcagggggtttcgcgc
atcgtcgccgtggacatggagtccgcgctgtcgatggccgaggcctga
DBGET
integrated database retrieval system
