Acidovorax sacchari: AVXHC19_26770
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Entry
AVXHC19_26770 CDS
T10802
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
asah Acidovorax sacchari
Pathway
asah03030
DNA replication
asah03430
Mismatch repair
asah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVXHC19_26770
03430 Mismatch repair
AVXHC19_26770
03440 Homologous recombination
AVXHC19_26770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asah03032
]
AVXHC19_26770
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_26770
Enzymes [BR:
asah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVXHC19_26770
DNA replication proteins [BR:
asah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVXHC19_26770
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVXHC19_26770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_assoc_2
AAA_30
Rad17
AAA_19
AAA_5
AAA_16
AAA_7
AAA_24
TsaE
Adeno_E1B_55K_N
nSTAND3
AAA_2
SKI
PIF1
Herpes_Helicase
RNA_pol_Rpb1_3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BFO55874
LinkDB
All DBs
Position
complement(3002401..3004428)
Genome browser
AA seq
675 aa
AA seq
DB search
MSYLVLARKYRPKTFSEMVGQEHVVQALSNALIQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGEDGQGGITATPCGVCQACRDIDAGRFVDYTELDAASNRGVDEVQGLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLEHLTRVLAQESVPAEPQALRLLARAARGSMRDALSLTDQAIAFGSGQLQEA
GVRQMLGSVDRSYVFRLIAALARGDGRTVVETSESLRMHGLSAASTLEEMSAVLQRMAVF
QAVPQMADAVDPADPEVSEIARLAGTLPADETQLLYSICLHGRTELGLAPDEYAALTMAL
LRLLAFKPAAEGGTPPAEKKTLKPPQAQPPAPEPETASAAEPAPSIPVPAPGAAPLPVEP
AAAALPEAQARPAEAHPPGPVPPSPTPQEPPSGEDPWADDAPPLATATMEAPASAQESPP
DAAVAAAVRLPVRTPADLQAHRPAEAAPPAASPPDFVAIPVRVAPEPGMRLQPAAAPGAL
PASARYTPTEEGDVWHATVMQLVAAEAINALVRELALQSQLVARDADHWLLRVERESLNQ
PTARERLRAALEAAGFARQISVEVGAVIDSPARRNAHAAAERQRRAQEIVENDPYVQALV
RDFGARIVPGSIKPA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtgctcgcccgcaaataccgccccaagaccttctcggagatggtcggg
caggaacatgtggtgcaggcgctctcgaacgcactcatccagcagcgcctgcaccacgcg
tacctgttcaccggcacgcgcggggtgggcaagaccacggtgtcgcggatcctggccaag
tcgctcaactgccagggcgaggacgggcagggtggcatcacggccacgccctgcggcgtg
tgccaggcgtgccgggacatcgatgccggccgtttcgtggattacaccgagctcgatgcc
gcctccaaccgcggcgtggacgaagtgcagggcctgctggaacaggccgtttacaagccg
gtgcagggccgcttcaaggtcttcatgatcgatgaggtccacatgctcacgaacaccgcg
ttcaacgcgatgctcaagacgctggaggagccgcccgaatacctgaagttcgtgctggcc
acgaccgacccgcagaaggtgccggtcaccgtgctcagccgctgcctgcagttcaacctg
cggcccatggcgccggaaaccgtgctggagcacctcacccgggtgctcgcccaggaaagc
gtgccggcggagccgcaggcgctgcggctgctggcgcgcgcggcgcgcggttccatgcgc
gatgcgctgtccctcaccgaccaggccatcgccttcggcagcggccagctacaggaagcc
ggcgtgcggcagatgctgggcagcgtggaccgcagctatgtattccgcctcatcgccgcg
ctggcccgcggcgacggccgcacggtggtggagacttccgaatccctgcgcatgcatggg
ctgtccgccgcctccacgctcgaggaaatgagcgccgtgctgcagcgcatggcggtgttc
caggccgtgccgcagatggccgacgccgtggaccctgccgatccggaggtctccgaaatc
gcgcggctggccggcacgctgcccgccgacgagacgcagctgctctacagcatctgcctg
cacggacgcacggagctcggcctcgcgcccgacgagtacgcggccctcaccatggcgctg
ctgcggttgctggccttcaagcctgctgcggagggcgggacgcccccggcggaaaaaaaa
acactgaaaccgccccaggcgcagcctccggcgcctgagccggagacggcatccgccgcg
gaacctgcaccttccattcccgttccggcacccggagcggcccccctgcctgtggagccc
gccgccgcggcactgcccgaggcgcaggcccggcctgccgaagcccatccgcccgggccc
gtgccgccgtcccccacgccgcaggagccaccctccggcgaggacccctgggcggacgat
gccccacctctggccaccgccaccatggaggcaccggcttctgcgcaggagtcgcccccc
gacgccgccgtggcggcggccgtgcgcctgccggtcaggacgccggccgacctgcaggcg
caccggcctgccgaggccgcgccgcctgccgccagcccccccgatttcgtggccattccc
gtgcgggtcgcgcccgagcccggcatgcggctgcagccggcggccgcgcccggcgccctg
ccggcctcggcccgctacacgccgacggaagagggcgatgtctggcacgccaccgtgatg
cagctcgtcgcggccgaggccatcaatgccctggtgcgcgaactcgcgctgcagtcccag
ctggtggcccgcgacgccgaccactggctgctgcgcgtggagcgcgagtccctcaaccag
cccacggcccgcgagcgcctgcgcgccgcgctggaggcggccggcttcgcccgccagatc
agcgtggaggtgggcgcggtcatcgacagccccgcgcggcgcaacgcccatgcggccgcg
gagcgccagcggcgcgcgcaggagatcgtggaaaacgatccctatgtgcaggcgctggtg
cgggacttcggggcgagaatcgtccctggcagcatcaaacccgcatga
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