Acidovorax sacchari: AVXHC19_26800
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Entry
AVXHC19_26800 CDS
T10802
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_26800 (addA)
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVXHC19_26800 (addA)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AVXHC19_26800 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF7216
Nitr_red_assoc
Motif
Other DBs
NCBI-ProteinID:
BFO55877
LinkDB
All DBs
Position
complement(3007726..3011283)
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AA seq
1185 aa
AA seq
DB search
MNRSDALGQSVQAAYEHNGRPVEREAFYAIACDPARSVAVEACAGAGKTWMLVSRILRAL
LEGCEPHEILAITFTKKAAGEMRQRLLEWLEAFSRTPLPALRGELQARGIPAEQATDDAC
ARLQGLFLQVLGAGRPVQIRTFHSWFAALLGTAPLAVLQSRGLPLHFELLEDDAEAVRRV
WPLFLQQVAADAGLGADFAESVALHGRSQTRKALESALAKRVEFELAEEGGVVDASVPPF
HAQSPQWADLDHPAQALAAEDCRARWLAWAAALGAESGKTPQKAADAIVTAFCDTADLQE
RLEALRSALFVAREDRLTRHLEKFAAAQEAERELQALCLARRQHEAWLHQRRMARLTRAL
VAAFGALKRDRGWVDMNDVERTALVMLSDPVLSGWVQERLDARVRHLLIDEFQDTNPLQW
QALHAWLAGYVGTGGGQHPPSVFIVGDPKQSIYRFRRAEPQVFRAAQAFVRQGLGGDLLA
CDHTRRNTPEVIAAVNAVMGAAQAQGDYAGFRDHTTESRDVGVLLRLPPIENAADEDENG
DGAPDARPDPLAWRDSLVQPRHEAEETLRMRECQQAARWVADRIAAGVPARQIMVLARKR
DRLSALQDALRDLHLPCVQPEKVELCEAPEVQDVVALLDVLVSPGHDLSLARALRSPLFG
VDDALLVRVAVARRDAERGPQESGVPGWMELLADRALLDAEMPGLSHDLRLYRHWVEQWP
PHDALDAIYRHRDVLARYAAASPAPLRAGVLANLRALLSAALQQDGGRYLTPYAFVRALK
RPGQRAPGRVDADAVRLLTIHGAKGLEADAVLLLDTDGRAQKAETMGVLVDWPGELPAPR
RFVFLASEASPPPSAADALAAELAERQREEINTLYVAMTRARHCLALSCVRVSQSAPGSW
WNRVAPLAADVPQDLSGPMGGMEDGPSATMDAQLPELPGWQDAVPLPMGLPPAADIQAGT
QAGAQAEAAVAGLPRERRAPSTPVSRQGEAMHQLLEQAGLAGALPGSAAGGSAGWPRARL
LQLARDFELPAELAEHAAVMAARILQGEGAWAWNSAEIELAMDEAPIVHRGQTLRIDRLV
RRSTGRGGEWWVLDYKSAANPERQAELVEQMRRYREAVQGQFPVEPVRAAFLTGDGRMVE
VDSSARGVPAPVPPLPSPTPAAGPSPAAAAAPPSGPQPVQGSLFD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgaataggtccgacgccctggggcaatccgtgcaggctgcctatgaacacaacggccgg
cccgtggagcgggaggctttctacgccatagcctgcgaccccgcccgcagcgtggcggtg
gaggcctgcgcgggcgcgggcaagacgtggatgctggtgtcccgcatcctgcgcgcgctg
ctggaaggctgcgagccgcacgagatcctggcgatcacgttcaccaagaaggccgcgggc
gagatgcggcagcgcctgctggaatggctggaggctttctcccgcacgccgctgccggcg
ctgcggggggaactgcaggcccggggcatcccggcggagcaggccacggacgacgcctgt
gcgcgcctgcaaggcctgttcctgcaggtcttgggtgcgggccggccggtgcagatccgc
accttccacagctggttcgccgcgctgctcggtaccgcgccgctggccgtgctgcagtcg
cgcgggctgccgctgcatttcgagctgctggaggacgatgccgaggccgtgcgccgggtg
tggccgctgttcctgcagcaggtggcggccgatgccggcctgggggcggatttcgccgag
tccgtcgccctgcacggccgctcccagacccgcaaggcgctggagtcggctctggccaag
cgcgtggagttcgaactggcggaagagggcggcgtggtcgatgcgtcggtcccgccgttc
catgcgcagtcgccgcagtgggcggacctggaccaccccgcgcaggcgctcgcggcggag
gattgccgtgcacgctggctggcctgggccgcggcgctgggggcggaatccggcaagaca
ccgcagaaagctgcggacgccatcgtcacggcgttctgcgacaccgcggacctgcaggaa
cggctggaggcgctgcggagcgcgctcttcgtcgccagggaggaccggctcacccgccat
ctcgagaaattcgccgccgcgcaggaggcggagcgggagctgcaggcgctgtgcctggcg
cggcgccagcacgaggcctggctgcaccagcggcgcatggcgcggctgacccgcgcgctg
gtggcggctttcggcgcgctcaagcgcgaccggggctgggtggacatgaacgacgtggag
cgcaccgcgctggtgatgctgtccgaccccgtgctcagcggctgggtgcaggagcgcctg
gatgcgcgggtgcgccatctgctcatcgacgaattccaggacaccaacccgctgcaatgg
caggcgctgcatgcctggctcgccggctatgtcggcaccggaggcgggcagcatcccccc
agcgtgttcatcgtgggcgaccccaagcagagcatttaccgttttcgccgcgccgagccc
caggtgttccgcgcggcgcaggccttcgtgcgccagggcctgggcggcgacctgctggcc
tgcgaccacacgcgccgcaataccccggaagtgatcgccgcggtcaatgccgtcatgggt
gccgcgcaggcccagggcgactatgcgggcttccgcgaccatacgaccgaatcgcgcgat
gtgggcgtgctgctgcgcctgccgcccatcgaaaacgccgcggacgaggacgagaatggg
gacggggcgccggatgcgcggcccgatccgctggcctggcgcgacagcctggtccagccc
cgccatgaagcggaggagacgctgcgcatgcgcgagtgccagcaggccgcccgctgggtg
gccgaccggatcgcggccggcgtgccggcgcggcagatcatggtgctggcgcgcaagcgc
gaccgcctgtcggccctgcaggatgccctgcgcgacctgcacctgccgtgcgtgcagccc
gaaaaggtggaattgtgcgaagccccggaagtgcaggacgtggtggccctgctggatgtg
ctggtctctccggggcacgacttgtccctcgcccgtgccctgcgctcccccttgttcggc
gtggacgacgccctgctggtgcgcgtggcggtggcccgcagggacgcggagcgcggaccg
caggaaagcggcgtgccgggatggatggagctgctggcggaccgggccctgctggacgca
gagatgcccgggctgtcgcacgatttgcggctctaccgccactgggtggagcaatggccg
ccccacgacgcgctggacgcgatctaccggcaccgcgacgtgctggcccggtatgcggcc
gcgtcccccgcgccgctgcgggccggcgtgctggcgaacctgcgcgcgctgctgtcggcg
gcgctgcagcaggacggcggccgctacctgacgccctatgccttcgtgcgcgccctgaag
cggccgggacagcgggcgccgggccgcgtggacgccgatgccgtgcgcctgctgaccatc
cacggggcgaaggggctggaggcggacgccgtgctgctgctggacaccgatggccgcgcc
cagaaggcagagaccatgggcgtgctggtggattggcctggcgaactgccggccccgcgc
cgcttcgtgttcctggcgagcgaggcatcgcccccgccgagcgccgccgatgcgctggcc
gccgaactggcggagcgccagcgcgaggagatcaataccctgtacgtggccatgacgcgc
gcgcgccactgcctggcgctgtcgtgcgtgcgtgtgtcgcaatccgcgccgggcagctgg
tggaaccgggtcgcgcccctggcggccgacgtgccgcaggacctatccggcccgatgggc
ggcatggaggacgggccgagcgccacgatggacgcgcaattgccggaactgcccgggtgg
caggacgccgtgccgctgccgatggggctgccgcccgcggccgacatacaggccggtaca
caggccggtgcacaggccgaagcggcggttgccggacttccccgggagcgccgtgcgccc
tccacgccggtgtccaggcagggcgaggccatgcaccagctgctggagcaggcggggctg
gcgggcgcgctgcccggcagtgccgcagggggctctgccggctggccacgcgcgcgcctg
ctgcagctggcgcgggatttcgagctgcctgccgaactggccgagcacgccgccgtgatg
gcggcccgcatcctgcagggcgagggcgcctgggcctggaacagcgccgaaatcgaactg
gccatggacgaggcccccatcgtccaccgcgggcagaccctgcgcatcgaccggctcgtg
cggcgctccaccggccgcggcggagaatggtgggtgctggactacaagagcgcggcgaat
cccgagcggcaggcggaactggtggagcagatgcggcgctaccgcgaggccgtgcagggc
cagttccccgtagagcccgtgcgcgcggccttcctgaccggtgatggccgcatggtggag
gtggactcttccgcccggggcgtgccggcgcccgttccgcccttaccatcgcccaccccg
gcggccggcccatcgcccgcagccgccgcggcccctccatcggggccgcagcccgtgcag
ggctcgctgttcgattga
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