Acidovorax sacchari: AVXHC19_27580
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Entry
AVXHC19_27580 CDS
T10802
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
asah Acidovorax sacchari
Pathway
asah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AVXHC19_27580 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_27580 (xseA)
Enzymes [BR:
asah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AVXHC19_27580 (xseA)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AVXHC19_27580 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BFO55955
LinkDB
All DBs
Position
complement(3099116..3100429)
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AA seq
437 aa
AA seq
DB search
MFERPDPATAPRIWDVGALCRAVADALEARFNPVAVRGEITGFSRASSGHCYFSIKDGQG
QIRCAMFRRAAMLLDGTPRDGEMVELRGRLAVYEARGDLQLIVESLQRAGQGALFEQFLR
LKARLESEGLFDSARKRGLPVMPRSIGLVTSPGAAALHDVVTALRRRVPHLPVVLAPALV
QGAAAPASICAALRVLYRMAEPSGDGEGHPPVDVILLVRGGGSIEDLWAFNDEQVARTLV
QSPVPVVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPQATWLAGMDALAGRLSDSLQ
RQIDGRHQRLDMAAQRLGRPSGLVARQELRLARLAQQLRHGAAWTAQRSAQRQDGLADRL
PKAVAQGVARQAQRLDHAALRLELLDPRLVLQRGYALLTDSEGLPVTRTAQVRAGDAVRA
AVSDGEIDLTVAAPRLL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcggccggacccagcaacggcgccgcggatctgggacgtcggggcgctgtgc
cgcgccgttgctgatgcgctggaggcacggttcaatcctgtcgcggtgcgcggggagatc
acgggcttctcgcgggcctccagcgggcattgctacttctccatcaaggacggccaggga
cagatccgctgtgccatgttccgtcgcgcagccatgctgctcgacggcacgccgcgggac
ggggaaatggtcgagctgcgggggcggctggcggtttacgaagcccggggtgacctgcag
ctcatcgtcgagagcctgcaacgtgccgggcagggggcgctgttcgagcagttcctgagg
ctcaaggcccggctggagtcggaaggcctcttcgactccgcccgcaagcgcggcctgccg
gtcatgccccgctcgatcgggctggtcacctcgccgggcgctgccgcgctccacgacgtg
gtgaccgccctgcggcggcgtgtcccgcacctgcccgtggtgctggccccggccctggtg
cagggtgcggccgcgccggcgtcgatctgcgccgcactgcgcgtgctctaccgcatggcc
gaaccgtccggcgacggcgaagggcatccgccggtggacgtgatcctgctggtgcgcggc
ggcggctccatcgaggacctgtgggccttcaacgacgagcaggtcgcccgcacgctggtg
cagagcccggtgccggtggtgtccggtgtgggccatgagacggatttcaccatcgccgac
ttctgcgccgacctgcgggccccgactcccacggccgcggccgaactggtcgcgcagccc
caggccacctggctggcgggcatggacgcgctggccggccgcctctcggacagcctgcag
cgccagatcgacgggcgccaccagcggctggacatggcagcccagcgcctgggacgtcct
tcggggctggtcgcgcggcaggaactgcgtctcgcgcgcctcgcgcagcagctgcgccac
ggcgcggcctggacggcccagcggtccgcccagcggcaggacggcctggcggaccgtttg
cccaaggccgtggcgcagggcgtggcccggcaggcccagcggctggaccatgcggcattg
cgcctggagctgctggacccgcgcctcgtgctccagcgcggctacgcactgctcaccgac
agcgaaggcctgcccgtgacccgcaccgcccaggtacgcgccggggacgccgtgcgcgcc
gccgtatcggacggcgagatcgatctcacggtggctgctccacgcctgctctga
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