Acidovorax sacchari: AVXHC19_29250
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Entry
AVXHC19_29250 CDS
T10802
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
asah Acidovorax sacchari
Pathway
asah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVXHC19_29250 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_29250 (uvrB)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVXHC19_29250 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AVXHC19_29250 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
UB2H
Kinesin
AAA_25
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BFO56122
LinkDB
All DBs
Position
complement(3307875..3309965)
Genome browser
AA seq
696 aa
AA seq
DB search
MPKPIETMPETRGEGTLVRFPDSPFELYQPYPPAGDQPTAIDQLVEGVRDGEVFQTLLGV
TGSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSAINEHIEQMRLSATKSVLERRDVVIVATVSAIYGIGAPEDYTKMRFI
MRVGDEISQRDVISRLIRMQYTRNEQDFARGTFRVRGDTIDVFPSEHSELAIRIELFDDE
IETLSLFDPLTGRVRQKIPRFTIYPSSHYVTPRDKVLAAVETIKLELNERLAQFVAEGKL
VEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPPTLTDYLPPDALMFLDES
HQMIGQLAAMFNGDRARKTTLVEYGFRLPSALDNRPLKFEEFERRMRQVVFVSATPADYE
KTHSGQVVDQVVRPTGLVDPIVEVRPATHQVDDVLQEIRVRVERNERVLITTLTKRMAEQ
LTDYLTDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNLNGQAILYADRITESMKKAIGETERRRAKQIAHNEA
QGITPRSIVKQVRDLIDGVYSEKTGREAERLEQEALRRAQVEDMSEKDVAREIKRLEKQM
LDHARNLEFEQAARVRDQLNRLKAQAFGASGADQAA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacccatcgaaaccatgccggagacgcgaggcgaaggcaccctcgtgcgcttc
cccgattcgcctttcgagctctaccagccgtacccgccggcaggtgaccagcccactgcc
atcgatcaactggtcgagggcgtgcgcgacggcgaggtcttccagaccctgctgggcgtg
accggctccggcaagacgttcaccatggccaacgtgatcgcccggctgggccggccggcg
atcgtgttcgcccccaacaagacgctggccgcccagctctacagcgagttccgggagttc
ttcccgaacaacgccgtcgagtacttcgtcagctactacgattactaccagcccgaggcc
tacgttccccagcgcgatctcttcatcgagaaggactcggccatcaacgagcacatcgag
cagatgcggctgtcggccaccaagagcgtgctcgagcggcgcgacgtggtcatcgtggcc
acggtgagtgccatctacggcatcggggcgccggaggactacaccaagatgcgcttcatc
atgcgcgtgggcgacgagatcagccagcgcgacgtgatctcccgcctgatccgcatgcag
tacacgcgcaacgagcaggatttcgcgcgcggcaccttccgcgtgcgcggcgacaccatc
gacgtgtttccctcggagcacagtgaactggccatccgcatcgaattgttcgacgacgag
atcgagaccctgtcgctgttcgacccgctcaccggtcgtgtgcgccagaagatcccgcgc
ttcaccatctaccccagcagccactatgtcactccccgcgacaaggtgctggccgccgtc
gagaccatcaagctggagctgaacgagcggctggcccagttcgtggccgagggcaagctg
gtggaggcgcagcgcctggagcagcgcacccggttcgacctggaaatgctcagcgaggtc
ggccactgcaagggcatcgaaaactacacgcgccacctgtccggcgccgcaccgggcgat
ccgccgcccacgcttaccgactatcttccccccgacgccctcatgttcctggacgagagc
caccagatgatcggccagctcgcggcgatgttcaacggcgaccgcgcccgcaagaccacc
ctggtcgaatatggcttccgcctgccgtccgcgctcgacaaccgtccgctcaagttcgag
gaattcgagcggcgcatgcgccaggtcgtcttcgtgtcggccacgccggccgactacgag
aagacccactccggccaggtggtggaccaggtggtgcgcccgacgggtctggtggacccc
atcgtggaggtccgccccgccacccaccaggtggacgacgtgctgcaggagatccgcgtg
cgtgtcgagcgcaacgagcgcgtgctgatcaccacgctcaccaagcgcatggccgagcag
ctcaccgactacctgaccgacaacggcgtgaaggtgcgctacctgcactccgacatcgac
accgtcgagcgcgtggaaatcatccgcgacctgcggctgggggctttcgacgtgctggtg
gggatcaacctgctgcgcgaggggctggacatccccgaggtgtcactggtggccatcctc
gatgcggacaaggaaggcttcctccgggccgagcgcagcctgatccagaccatcgggcgt
gccgcgcgcaacctgaacggacaggcgatcctctacgcagaccgcatcaccgagtccatg
aaaaaagccatcggcgaaacggaacggcggcgcgcgaaacagatcgcacacaacgaagcc
cagggaatcacgccacggagcatcgtcaagcaggtccgcgacctgatcgacggggtctac
agcgagaagaccggccgggaggccgagcgtctcgaacaggaggccctgcgacgggcgcag
gtcgaggacatgtccgaaaaggacgtcgcccgcgaaatcaagcggctggaaaagcagatg
ctggaccatgcgcgcaacctggagttcgaacaggccgcccgggtgcgggaccagctgaac
cggctgaaggcgcaggccttcggagccagcggggccgaccaggcggcttga
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