Acidovorax sacchari: AVXHC19_31190
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Entry
AVXHC19_31190 CDS
T10802
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
asah Acidovorax sacchari
Pathway
asah02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AVXHC19_31190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asah02000
]
AVXHC19_31190
Transporters [BR:
asah02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AVXHC19_31190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BFO56316
LinkDB
All DBs
Position
complement(3518183..3519802)
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AA seq
539 aa
AA seq
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MSDKIPEFDRLVGPAESQRVMQSLARGASRRDVLAMFLAGGMQASLAGGLATMAARAHAQ
TPRRGGRIRVAGATAAATDTLDPAKQSNQTDYSRGNMLYNGLFSLDGSLTPQPALAESHS
TADAKTWVFKLRKGVVFHDGKALEPEDVVFSLMRHKDPATASKAKVLAEQIDSVKASGPG
EVTVVLTQPNADLPVILGTFHFHIVKNGTTDFNAGIGTGPYKLKEFKPGVRSLVVRNDAY
WKPGKPYLDEIEFVGIGDETARVNALLSGGMDLVASVNPRAVARVKGTPGYAIFTTQSGQ
YSDLILRKDMGPGANPDFVLAMKHLFDREQMKKTIALDYAVLGNDQPVDPTNRFYFAGLP
QRTFDLDKAKFHLQKSGVTGKIPMVTSPAAMYSTEIALLLQQSGQRIGLDLDVKRMPADG
YWSNHWLTNPVGFGNVNPRPSADTLLTQFFKSDAAWNESRWKSPQFDQLLVAARAETDQA
KRKQMYADMQTMIHQEAGIGIPLFLASIDGHSSKLKGLSPIPLGGLMGYAFAEHVWLEA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaatccccgagttcgaccgcctcgtcggccccgcagagagccagcgcgtg
atgcagtcgctggcacgcggtgcatcgcgtcgcgatgtgctggccatgttcctcgcgggg
ggcatgcaggcgtccctggcgggcggcctcgccaccatggccgcccgtgcgcacgcgcag
acgccgcggcggggagggcgcatccgcgtggcgggcgccaccgcggccgccaccgatacg
ctggacccggccaagcagtccaaccagaccgactattcgcgcggcaacatgctctacaac
gggctgttctcgctggacggcagcctcacgccgcagccggcgctggccgagtcgcactcc
acggccgacgcgaagacctgggtgttcaagctgcgcaagggcgtggtcttccacgacggc
aaggccctggagcccgaagacgtggtgttctcgctgatgcgccacaaggatcccgccacg
gcgtccaaggccaaggtgctcgctgaacaaatcgacagcgtgaaggcttccggccccggc
gaagtgacggtggtgctgacgcagcccaatgccgacctgcccgtgatcctgggcaccttc
cacttccacatcgtcaagaacggcactacggacttcaacgccggcatcggcaccgggccg
tacaagctcaaggagttcaagccgggcgtgcgctccctggtggtgcgcaacgacgcctac
tggaagcccggcaagccctacctggacgagatcgagttcgtcggcatcggcgacgagacg
gcgcgcgtgaacgcgctgctgtccggcggcatggacctcgtcgcctcggtgaacccccgg
gccgtggcccgcgtcaagggcacgccgggctacgcgatcttcaccacgcagtcggggcag
tattcggacctcatcctgcgcaaggacatgggcccgggcgcgaatccggacttcgtcctg
gcgatgaagcacctgttcgaccgcgagcagatgaagaagaccatcgcgctcgactacgcg
gtgctgggcaacgaccagcccgtcgatccgaccaaccgcttctacttcgcgggcctgccg
cagcgcaccttcgatctggacaaggccaagttccacctgcagaagtcgggcgtgacgggc
aagatcccgatggtcacctcgcccgcggcgatgtattccaccgagatcgcgctgctgctg
cagcagtcgggccagcgcatcggcctggacctggatgtcaagcgcatgccggccgacggc
tactggtccaaccactggctcaccaaccccgtgggcttcggcaacgtgaacccgcgcccc
agcgcggacacgctgctcacgcagttcttcaagtccgacgcggcatggaacgagtcgcgc
tggaagagcccgcagttcgaccagttgctggtggccgcgcgcgccgagaccgaccaggcc
aagcgcaagcagatgtatgccgacatgcagaccatgatccaccaggaggcaggcatcggc
atcccgctgttcctcgccagcatcgacggccacagctccaagctcaagggcctctcgccc
attccgctgggggggctgatgggctatgcattcgcggagcacgtgtggctggaggcttaa
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