Acidovorax sacchari: AVXHC19_33700
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Entry
AVXHC19_33700 CDS
T10802
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asah Acidovorax sacchari
Pathway
asah03030
DNA replication
asah03410
Base excision repair
asah03420
Nucleotide excision repair
asah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVXHC19_33700 (polA)
03410 Base excision repair
AVXHC19_33700 (polA)
03420 Nucleotide excision repair
AVXHC19_33700 (polA)
03440 Homologous recombination
AVXHC19_33700 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asah03032
]
AVXHC19_33700 (polA)
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_33700 (polA)
Enzymes [BR:
asah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVXHC19_33700 (polA)
DNA replication proteins [BR:
asah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AVXHC19_33700 (polA)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AVXHC19_33700 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVXHC19_33700 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BFO56567
LinkDB
All DBs
Position
complement(3829453..3832236)
Genome browser
AA seq
927 aa
AA seq
DB search
MSKPKTLVLVDGSSYLYRAFHAMPDLRAVPGDPASPATGAIRGMINMLQALRRDYPADYA
ACVFDASGPTFRDTLYPEYKAHRAPMPDDLRAQIEPIHEVVRLLGWPVVCVPGVEADDVI
GTLAACAARQGIEVIVSSGDKDLSQLVDEHITIIDTMSGKRRDVAGVTAEFGVPPTLMVD
YQTLVGDAVDNVPGVPKVGPKTAAKWLNEYGSLDALLARAGEIKGVAGENLRNALDWLPK
GRELVTIRTDCDLAGHVEGLPALDGITAGALETAQLREFYEKFGFKGLARALEDTTPANA
TATLPGASGDLFADSGPTFVAEAAQGREVAYDTILTWEEFDRWFARIQAADLVALDTETN
SLDELRAQIVGLSFSVEPGAAAYIPLAHSGPDAPEQLPLDAVLERLKPWLEDASSPKLGQ
HVKYDRHVFANHGIDVHGYAHDTMLQSYVLEVHRPHNLASLAERHTGRTGISYEDLCGKG
AKQIPFAQVPVDQAAAYSCEDSDQTLDVHRVLWPLIEADEKLRGIYALEMESSEVLFRIE
RNGVLIDPATLQQQSHDLGQRILKLEQEAYDIAGQPFNLGSPKQLGEIFFDKLGLPVVKK
TATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLGQLADPRTGRVHTHYAQ
AVAVTGRLSSNEPNLQNIPIRTAEGRRVREAFVAPPGRVIASADYSQIELRIMAHLSGDD
ALLRAFTEGLDVHRATAAEVFGVAVDQVSSEQRRYAKVINFGLIYGMSSFGLARNLGIDN
KAAAAYIDRYFQRYPGVKQYMDETKASAKARGYVETVFGRRLYLPEINSPNGPRRGAAER
AAINAPMQGTAADLIKKAMVAVQAVLDADKPQVLMIMQVHDELVFELPEDEAGWLRTEIP
RLMAGVAELKVPLLAEVGTGPNWEKAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccaagaccctggtgctggtggacggctccagctatctctaccgcgccttc
catgccatgccggacctgcgcgccgtgcccggcgacccggccagccccgccacgggggcc
atccgcggcatgatcaacatgctgcaggcgctgcgcagggactatcccgccgattacgcc
gcctgcgtcttcgatgcgagcggaccgaccttccgcgacacgctctaccccgaatacaag
gcgcaccgcgcgcccatgcccgacgacctgcgcgcgcagatcgagcccatccacgaggtc
gtgcgcctgctgggctggccggtggtctgcgtccccggcgtcgaggccgacgatgtgatc
ggcaccctcgcggcctgcgcggcgcgccagggcatcgaggtcatcgtctccagcggcgac
aaggacctgtcgcaactggtggacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgcgacgtggcgggcgtcacggccgagttcggtgttccgcccacgctcatggtcgat
taccagacgctggtgggggacgcggtggacaacgtgcccggcgtgcccaaggtggggccc
aagacggccgccaagtggctgaacgagtacggttcgctcgacgcgctgctggcacgggcg
ggcgagatcaagggcgtggcgggcgagaacctgcgcaacgcgctcgactggctgcccaag
ggccgcgaactggtgaccatccgcaccgattgcgacctggccggccacgtggaaggcctg
ccggcgctggacggcatcacggccggcgcgctggagacggcgcagctgcgcgagttctac
gaaaagttcggcttcaaggggctggcccgcgcgctggaagacaccacgcccgccaatgcc
acggccacgctgcccggcgcgagcggcgacctgttcgccgacagcggcccgaccttcgtg
gccgaggccgcgcaggggcgcgaggtggcctacgacacgatcctcacgtgggaggagttc
gaccgctggttcgcccgcatccaggcagccgacctggtcgcgctggataccgagaccaac
tcgctcgatgagctgcgcgcccagatcgtgggactgagcttcagcgtggagcccggtgcc
gccgcctacattccgctcgcgcattccggccccgacgcgcccgagcaactgccgctggac
gccgtgctggagcgcctcaagccctggctggaggatgcctcgagcccgaagctgggccag
catgtcaagtacgaccgccacgtgtttgccaaccacggcatcgacgtgcacggctatgcg
cacgacaccatgctgcagagctacgtgctggaagtgcatcgcccgcacaacctcgcgagc
ctggccgagcgccacacgggccgcaccggcatcagctacgaagacctctgcggcaagggg
gcgaagcagattccgttcgcgcaggtgccggtggaccaggccgccgcctattcctgcgag
gactcggaccagacgctcgatgtgcaccgcgtgctctggccgctgatcgaggccgacgag
aagctgcgtggcatctacgccctcgaaatggagagcagcgaggtgctgttccgcatcgag
cgcaacggcgtgctgatcgacccggccacgttgcagcagcagagccacgacctgggtcag
cgcatcctcaagctcgagcaggaggcctacgacatcgccggccagcccttcaacctcggc
agtcccaagcagctcggcgagatcttcttcgacaagctcggcctgccggtggtgaagaag
accgccaccggcgcgcgcagcaccgatgaggaggtgctggaaaagctcgcggaggactat
ccgctgcccgccaagatcctggagcaccgcagcctctccaagctcaagggcacctacacc
gacaagctgggccagctggccgatccgcgcacgggccgcgtgcacacgcactacgcgcag
gccgtggcggtgacggggcggctgtcgagcaacgagcccaacctgcagaacatccccatc
cgcacggccgagggccggcgcgtgcgcgaggccttcgtggcaccgccgggccgcgtgatc
gccagcgccgactacagccagatcgaactgcgcatcatggcccacctgagcggcgacgac
gcgctgctgcgcgccttcaccgaggggctggacgtgcaccgcgccaccgcggccgaggtg
ttcggcgtggcggtggaccaggtgagcagcgagcagcgccgctatgccaaggtgatcaat
ttcgggctcatctacggcatgagcagcttcggcctcgcgcgcaacctgggcatcgacaac
aaggccgccgcggcctacatcgaccgctatttccagcgctaccccggcgtgaagcagtac
atggacgagaccaaggcctcggccaaggcgcgcggctacgtcgagacggtgttcggccgc
cggctctacctgccggagatcaattcgcccaacggcccgcggcgcggcgcggccgagcgc
gccgccatcaacgcgcccatgcagggcacggcggccgacctcatcaaaaaggcgatggtg
gccgtgcaggcggtgctggatgcggacaagccgcaggtgctgatgatcatgcaggtgcac
gacgaactggtcttcgaactgcccgaggacgaggcgggctggctgcgcacggaaatcccg
cggctcatggcgggcgtggctgaactcaaggtccccctgctggccgaggtgggcaccggg
ccgaactgggagaaggcgcactga
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