Acidovorax sacchari: AVXHC19_33840
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Entry
AVXHC19_33840 CDS
T10802
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asah Acidovorax sacchari
Pathway
asah03420
Nucleotide excision repair
asah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVXHC19_33840
03430 Mismatch repair
AVXHC19_33840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_33840
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVXHC19_33840
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVXHC19_33840
MMR (mismatch excision repair)
Other MMR factors
AVXHC19_33840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BFO56581
LinkDB
All DBs
Position
complement(3846938..3849394)
Genome browser
AA seq
818 aa
AA seq
DB search
MLPHDLFSGAPAPFGAAEPGPAAASAAASPLLQNLNDEQLAAVTLPAGHALILAGAGSGK
TRVLTTRIAWLLQNGYASPGGILAVTFTNKAAKEMTARLSAMLPVNVRGMWIGTFHGLCN
RLLRAHHKSAGLPATFQILDTQDQLSAVKRLCKQFNIDEERFPPKQMAYFISGCKEEGLR
PGDVDARDADGRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQRRFQH
ILVDEFQDTNKLQYAWLKQLAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNMQDFV
REFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRVYEAPTDLA
EAQWMVDEIRQLARNDGFERREIAVLYRSNAQSRVIESALFNAAVPYRVYGGLRFFERAE
IKHALAYLRLLENPHDDTSFMRVVNFPPRGIGARTVEVLQDAARQAGCSLHDAVSAVPGK
AGANLGAFVAMVDVMREQTQGQTLRGIIGQMLESSGLVEHYRAEKEGADRLENLDELINA
AESFVTQEGFGRDAVALPVDEHGASLRQSPASQGIDTSLPVVDEPLPGGVDADTGETLSP
LAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRD
GLEEERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPRQQG
FGSFAPQSGGRGGSAGTPWGGFGSGAKSETFASPPVPAQKAPPAHGLRVGLAVFHTKFGE
GKVLSLEGAGDDARAQVNFPRHGTKWLALSVAKLTVVE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctcccacacgacctgttttccggcgcgccagcgcctttcggcgctgccgagccgggc
cccgctgccgcatcggccgccgcgtcgcccctgctgcagaacctgaacgacgagcagctt
gccgccgtcacgctgcccgcgggccacgccctgatcctggccggtgcgggctccggcaag
acccgcgtgctcaccacgcgcatcgcctggctgctgcagaacggctatgcctcgcccggc
ggcatcctggccgtcaccttcaccaacaaggccgccaaggaaatgaccgcgcgcctctcg
gccatgctgccggtgaacgtgcgcggcatgtggatcggtaccttccacggcctgtgcaac
cggctgctgcgtgcccaccacaagtcggcgggcctgcccgccaccttccagatcctggat
acgcaggaccagctctcggccgtgaagcggctgtgcaagcagttcaacatcgacgaggaa
cgctttcccccgaagcagatggcctacttcatcagcggctgcaaggaagagggactgcgg
ccaggcgacgtggatgcgcgcgatgcggacgggcgcaagaaggtggagctctaccagctg
tacgaggagcagtgccagcgcgagggcgtggtggatttcggcgagctgatgctgcgcagc
tacgaactgctgcgcgacaacgacccgatccgcgcgcactaccagcggcgcttccagcac
atcctggtggacgagttccaggacacgaacaagctgcagtacgcctggctcaagcaactc
gcgggcgacgtggtggatggccgcctcgtcacgcacggcagcgtgctggcggtgggcgac
gacgaccagagcatctatgccttccgcggcgcgcgcgtgggcaacatgcaggacttcgtg
cgcgagttcgacgtgcgccaccagatcaagctggagcagaactaccgcagctacagcaac
atcctcgattcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctg
cgcaccacgcaggggccgggcgagccggtgcgcgtctacgaagcgcccaccgacctggcg
gaggcgcaatggatggtggacgagatccgccagctcgcgcgcaatgacggcttcgagcgg
cgcgagatcgccgtgctctaccgcagcaacgcgcagagccgggtgatcgaatcggcgctc
ttcaatgccgcggtgccttatcgcgtgtacggcggcctgcgcttcttcgagcgcgcggaa
atcaagcatgcgctggcctacctgcgcctgctggagaacccgcacgacgacacgagcttc
atgcgcgtggtgaacttcccgccgcgcggcatcggggcgcgcacggtcgaggtgttgcag
gatgcggcgcggcaggccggctgttcgctgcacgatgccgtgagtgccgtgcccggcaag
gcgggcgccaacctgggcgccttcgtcgccatggtggatgtgatgcgcgagcagacgcag
ggccagacgctgcgcggcatcatcggccagatgctcgaatcgagcggactggtggagcac
taccgcgccgaaaaggaaggcgcggaccggttggagaacctggatgaactgatcaatgcc
gccgagagcttcgtcacgcaggaagggttcggccgcgacgccgtcgcgctgccggtggac
gagcacggcgccagcctgcgccagagcccggcgagccagggcatcgatacctcattgccc
gtggtggatgaaccgctgcccggcggcgtggatgccgataccggcgagacgctgtcaccc
ctggccgccttcctcacgcacgccgcactggaagccggcgacaaccaggcccaggccggg
caggatgccgtgcagctcatgaccgtgcatgcctccaaggggctggagttcgatgccgtg
ttcatcggcggcatggaggagggccttttcccgcacgagaactccatgagcgaccgggac
ggcctggaggaagagcgccgcctgatgtacgtggcgatcacgcgggcgcgcaagcggctc
tacctgagccattcccagacgcgcctgctgcacgggcagacgcgctacaacatcaagagc
cggttcttcgacgagctgcccgaggcggcgctgaaatggatcacgcccaggcagcagggc
ttcggcagcttcgcgccgcagtccggcgggcggggcgggagtgcggggacgccgtggggc
ggcttcgggtcgggggcgaagtcggagaccttcgcgagcccgcccgtgccggcacagaag
gcaccgcccgcgcatgggctgcgcgtggggctggcggtgttccacaccaagttcggcgag
ggcaaggtgctgtcgctcgaaggcgcgggcgacgatgcgcgcgcccaggtgaacttcccg
cggcacggcaccaagtggctggcgctgtcggtggccaagctcacggtggtggagtga
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