KEGG   Acidovorax sacchari: AVXHC19_35120
Entry
AVXHC19_35120     CDS       T10802                                 
Symbol
vgrG1b
Name
(GenBank) type VI secretion system spike protein VgrG1b
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
asah  Acidovorax sacchari
Pathway
asah03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:asah00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AVXHC19_35120 (vgrG1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:asah02044]
    AVXHC19_35120 (vgrG1b)
Secretion system [BR:asah02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AVXHC19_35120 (vgrG1b)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484
Other DBs
NCBI-ProteinID: BFO56709
LinkDB
Position
complement(3990772..3993096)
AA seq 774 aa
MTRRVTIQTPLGEQLHFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
GGGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVEEVLS
RYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIV
AGHEPLPGAAVIPFYPPEKSATADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLATGYTFT
LENYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGEALKHNEEQGSFQKFSLTAQPTS
LPYTPARKTQKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWVRV
ATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRK
TIDRDETNTIHRDRTETVDRDEKITVHNNRTERVDHDETISIGDNRKEDVGIDETVSIGN
NRSKTIGRNEKDKIGNNWSIKVGSFKTETIGLAYLQNVGLAKMVNIGAAYNVNVGAAMVV
NVGLSQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgacacgccgcgtcaccatccagacgcccctgggagagcagctgcatttccggcagctg
cggggcagcgaggagctgagccagcttttctccttcgacatcgacctgctctctgagggg
cgcgacatcgatcccaaggcgctgctgggcaagacggcgacggtggagatcgagaccgaa
ggcggcggcaagcggtacctggacggcctggtcacgcgcttcggcatgcaggggcaggac
catcggctgtactcgtaccacctgcgcctgcagccctggctctgggtggccacgcggcgg
caggatttccgcatcttccagttcaagaccgtcccgcagatcgtggaagaggttttgagc
cgttacggttatccgatgcagttgaagctcacgcgcgcgtaccgcgcctgggactactgc
gtgcagtacggcgagagcgacttcgatttcgtctccaggttgctggagcatgaaggggcg
tactactacttccagcacgcgagcggccagcacaccctggtgatcgccgacgacatcgtg
gccggccacgagcccctgccgggcgcggccgtgatcccgttctacccgcccgagaagtcg
gccacggccgaccgcgagaacatccacgcctggacattgggcgaggagatcaagcccggg
cggtactacaacgatgactacgacttcaagaagccccggtcggatctctccaacatgcgc
cagcagcccccggggcacgcgcacgacgcgtacgagatctacgaatggccgggcggctac
gtgcagcacggcgacggcgagcaatatgcccgcgtgcgcctgcaggaaggcctgacgggc
cacagcaccgtcaggggtgaatcccgccaccggagcctggccacgggctacaccttcacg
ctggagaactacccgcgcggcgaccagaaccggcaatacctcatcacgggcgtcacctac
cacctgcacgagaacccgcgcagttcttccttcaacagcgccaagccgggcgaggcgctc
aagcacaacgaagagcagggctccttccagaagttcagcctcacggcccagcccacgagc
cttccgtacacgcccgcgcgcaagacgcaaaagccgagaaccacgggcccgcagaccgcc
gtcgtggtcggcccggccggggaagaaatctggaccgacgaatacggccgcatcaaggtg
cagttccactgggaccggctgggggcgatggacgagaactccagctgctgggtgcgggtg
gccacgagctgggcgggctcgggcttcggggcgatctcgatcccgcgcatcgggcaggaa
gtgatcgtggacttcctgaacggcgacccggactatcccatcgtcacgggcagcgtctac
aacgccgcgaacatgccgccgtgggccttgccgggcaatgcgacgcagtcgggcatcaag
acgaagtcgagcaagggcggggccttcggcgacgggatgaagaacggcgcgggcgacgcc
aacgcgatccgcttcgaggacaagaagggcgcggagcaggtgtggctgcatgcgcagaag
gaccagctcatcgaggtggagaacgacgaggaccactgggtgggccaggaccggcgcaag
acgatcgaccgggacgagacgaacaccatccaccgggaccgcacggagacggtcgatcgc
gacgagaagatcacggtgcacaacaaccgcacggagcgggtggaccacgacgagacgatc
agcatcggcgacaaccggaaggaagacgtcggcatcgacgagacggtctccatcggcaac
aaccgcagcaagaccatcggccgcaacgagaaggacaagatcggcaacaactggtcgatc
aaggtcggcagcttcaagaccgagaccatcggcctggcctacctgcagaacgtgggcctg
gcgaagatggtgaacatcggcgcagcctacaacgtgaacgtgggcgcggccatggtggtg
aacgtggggctcagccagtccaccaacgtgctcatgaaccggtccgtcaccgtggggcag
agccagaccacgaaggtcggtgccgaccgcacggacgagacctccgacaactacacggag
aacgtgggcaagaactcggccaccaccgtgggcgaggtgcgcaccctgagcgtgggcaag
gagatgtccgtcaaggtcggagacgcgatcgagatccagtgcggcaaggccgtgctgcgc
atgaccagcgacggcacggtgcagatcaacgggcagacgatttccatcgcgggcagctcc
aaggtgacggtctcgtcgccggacagccacgtcaatcctgcgtga

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