Acidovorax sacchari: AVXHC19_36250
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Entry
AVXHC19_36250 CDS
T10802
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asah02044
]
AVXHC19_36250
02035 Bacterial motility proteins [BR:
asah02035
]
AVXHC19_36250
Secretion system [BR:
asah02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AVXHC19_36250
Bacterial motility proteins [BR:
asah02035
]
Pilus system
Pilus assembly proteins
AVXHC19_36250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
PilY1_homolog_dom
PD_1611-like_2nd
Motif
Other DBs
NCBI-ProteinID:
BFO56822
LinkDB
All DBs
Position
complement(4116573..4121075)
Genome browser
AA seq
1500 aa
AA seq
DB search
MNSQSPSHRPSLRQRGFINKPFLGAVAVLVGLFAFGTSFLAMGTGAPVTTPPINLSSDPL
YAVNVKDKPTMALALSVEFPTVGAQYVNVPNTNTDDSYANTKEYLGYYDAESCYQYNDAP
TETPESGRTAADYKRFDPVGRATNRKCSDAFSGNFLNWATNSAVDMLRLALSGGDRYVDT
STLTILQRAVLPNGDPICMWNSNNFPAKRLAKDGGGANSYWGAVPTAMVTGANGNDIWVA
NTLNRVYFRAGSSAAGSCSDTSGYTLGAPTTTQSRGTTTYQNNVALPNDAVLCTAENSMC
NFSGVREVWFGVPPTRLTPRGNWAIVPASNGINCNYQVIGDPAPGQGKSCYTRPYTGTWQ
PPQTTALNSDGFFYSRVQVCNKTGDLLQDIRDYGLCTQYPSGNYKPVGVIQKYSDQLRLA
AFGYLMDQTASYNNGRYGGVLRAPMKYVGQKTFDVQGREETATNAKAEWNINTGIFNKNP
ESDTVFGISGVINYLNQFGRTGPVPGRYKQYDPVGELYYQSLRYMQGLPPTADAISGLGT
PSTGSALYDGYPVYTDWTNIDPYGGTRSSSENYSCVRSNIVVIGDINTHDGNWRNIPTSD
DPANNATNFRTWHQVVQSFEKGISTAYVDGQGVNRTTSNPNTANPNVPSNSQTSQIMGYA
YWAHTQDIRGTRWTAATAKQRPGLRVKTFLFDVNEYATQNDAATRQTRNQFFMAAKYGGF
NSTSSSSSSGSPDPYNTYGNPFRNQITDTNDNNVWQKPSAPGEASSYYLQSDARGVLAAF
RAIFENSIGSARSIAGSSSASRVQASTDNFLYSAKFDVASWTGDVIAEQITRSGSGSSVG
LSVSSNPVWSAAARLKIKNAADRKIFAGHGSRLAATEFTWSAINGKAMQTSLSKASPSAT
ADSLGPDRLNYLRGVRTNEGAGAQFRVRTELLGDIVNSGVTFSGPPAAAFTGNSYALFKT
ENAGRSPVVFAGANDGMLHAFAAQTDTGKGITAGDELFAYIPSWMGPKLSALTSPTYVNN
HQAYVDAPSAVGEAQVAFTSGAGSATDWKTVLVSGTGAGGRGVFALDVSKPETFAVGNAL
WEFTGADDADMGFVVGRPQILKFRTGADTYRWFAVVASGADNYSSTFDNGGGGGRPALFL
LALDKASGDAWVEGTNYFKLIFPVDTAVAATVATGMANFTPLYALAGDVTQIYAGDLHGK
VWKLDFTCTRSSSTDTSCTSYGYKATSNWTVAGLSSFGSGGTPYPFFIAKDASGNVQPIT
SAPQLFTGPIVNSKETFYVLVGTGKYLESSDRTSTRAQSVYALYDNGSTTADSSNPTSAI
SGRSRMTAGTVSTSAQTVTVPSFKWGRPQSDGDTTQRAGWYIDLPTSGERSISGFTDLGG
LTVAFSTVIPGDVASAGACDANPGSGRQYTLDVSLGNGSTAESRVGLLSAFVVIEDTASS
TVTNYDSTGQAIRTIMKRSLQTGSSGVTEGKSTTVQEVVGRLSWRQIYDYRQLRKDATTP
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccagagtccatcccaccggccctccctgcgtcagcggggcttcatcaacaag
ccattcctgggggctgtggccgtcctcgtgggccttttcgcgtttggcacatcgttcctg
gcgatgggaacgggtgctcccgtcaccacgccgccgatcaacctgtccagcgacccgctg
tacgcggtgaacgtgaaggacaaacccaccatggccctggccctgtcggtggagtttccc
accgtgggcgcccagtatgtcaacgtgcccaatacgaataccgatgattcgtacgccaac
accaaggaatacctcggctattacgacgcggaaagctgctaccaatacaacgacgcgccg
accgagacgcctgaaagcgggaggactgccgccgattacaaacgcttcgatcccgtagga
agagccacgaaccgcaagtgcagcgatgccttcagcggaaacttcctgaactgggccacc
aattcggcggtggacatgctgcgcctggcgctctccggtggcgaccgctatgtcgatacc
tcgacgctgaccatcctgcagcgggccgtgctgccgaacggcgatcccatctgcatgtgg
aactcgaacaacttcccggcgaagcggctggcgaaggacgggggaggggcgaactcctat
tggggcgccgtgccgactgccatggtgaccggcgccaacggcaacgacatctgggtggcc
aacaccctgaaccgggtgtacttccgggcggggtcgtccgccgcgggatcctgctccgac
actagcggatatacgctaggcgctcccaccacaacgcagagccgtggcacgaccacctac
cagaacaacgtagccttgccgaacgatgccgtactttgcactgcggaaaattccatgtgc
aacttctccggcgtgcgcgaggtgtggttcggtgttccccccacccgactgaccccgcga
gggaactgggccatcgtccccgcctcgaatggcatcaattgcaactaccaggtaatcggt
gatcccgcacctggtcaaggcaagagttgctatacgcgcccctacacaggtacgtggcag
cccccccaaaccacggccctcaattccgacggtttcttctattcacgcgtgcaggtctgc
aacaagaccggcgacctgctgcaggatatccgtgactacggcctgtgcacccaatacccg
agtggcaactacaagcccgtgggcgtgatccagaagtattccgaccagctcaggctggcg
gcttttggctacctgatggaccagacggcgagctacaacaatggccgctatggtggcgtt
ctgcgtgcacccatgaaatacgtcggtcagaagaccttcgatgtgcaggggcgtgaggag
accgcgacgaatgcgaaggccgagtggaatatcaacaccggcatcttcaacaagaatccc
gaatcggataccgtcttcggcatcagcggggtgatcaattacctgaaccagttcgggcgg
accgggcccgtgcccgggcgctacaagcaatacgatccggtcggtgaactctattatcag
tcgctgcgctacatgcagggcctgccgcccaccgcggatgcgatttccggcctgggcact
ccttccaccggcagcgcgctgtacgacggctatcctgtctataccgactggacgaacatc
gatccttatggggggacgcgttcctcctccgagaactattcgtgcgtgcgcagcaacatc
gtggtgatcggggacatcaacacccacgatggcaattggcgcaacatccccacctccgat
gatccggccaacaatgccacgaacttccggacgtggcaccaggtggtgcagtcgttcgag
aaaggcatttccacggcctacgtggacggccagggcgtgaaccgcacgacgtccaatccg
aacactgccaatccgaacgttccttccaacagccagaccagccagatcatgggatacgcc
tattgggcgcatacccaggacatccgcggcacccggtggactgcggcgaccgccaagcag
cgcccgggcctgcgtgtgaagacgttcctgttcgacgtgaacgaatacgcaacccagaac
gacgccgctacccggcagacgcgcaaccagttcttcatggccgccaaatacggtggcttc
aattcgacttcctcgtcgtcatcgagcggttcgccggatccgtacaacacttacggcaat
cctttcaggaaccagatcaccgatacgaacgacaacaatgtctggcaaaagccaagtgct
cccggtgaggcatccagctactatcttcagagcgatgcgcgtggcgtgcttgccgcgttc
agggcgatcttcgagaactcgatcggaagtgcgcgcagcatcgccggcagctcctctgct
tctcgcgtgcaggccagcaccgacaatttcctgtattccgcgaagttcgacgtcgcttca
tggacgggcgacgtgatcgccgagcagatcacgcgttccgggagcggttcgtcggtcggc
ctttccgtgtcgtccaatccggtgtggagtgccgctgcccgcctgaaaatcaaaaatgct
gccgatcggaagattttcgccggccatggcagccggctggctgcgacggagttcacctgg
agcgcaatcaacggcaaagcgatgcagacttccctgagcaaggcttcgccgagcgctacg
gcggattcgctggggccggaccggttgaattacctgcgtggtgtacgcaccaatgaaggc
gccggtgcgcaattccgggtacgtacggagctgctgggggatatcgtgaactccggagtc
acattctccggcccgcctgcagcagccttcacgggtaacagctatgcgttgttcaaaact
gagaatgccggtcgttctccagtcgtgttcgcaggtgcgaacgatggcatgctgcacgcc
ttcgcagcgcagacggacactggcaagggaatcaccgcaggcgatgaactgtttgcctat
attcccagctggatgggccccaagctctcggccctgacttcgccgacctacgtcaacaac
caccaggcctatgtcgacgcaccctcggccgtgggagaggctcaggtggcatttacgtcg
ggtgctggcagtgccaccgactggaagaccgtgctcgtttccggtaccggcgccggtggc
cggggtgtgttcgcgctcgacgtctccaagccggaaacctttgcagtcggcaatgcgctg
tgggagttcactggcgctgatgatgcagacatgggtttcgtggtcggacgtccgcagatc
ctcaagttccggaccggcgcagatacctaccgctggtttgccgtcgtggccagcggcgcg
gacaattactccagcaccttcgacaacggtggcggcggtggccgtccggcgctcttcctg
ctcgcgctggacaaggcctcgggggatgcctgggtcgaagggaccaactatttcaagctg
attttccccgtggatacggctgtggcggccacggtagccacgggtatggcgaatttcacg
ccgctctacgcccttgccggcgacgtgacgcagatctatgccggcgacctgcatggcaag
gtctggaagctggatttcacctgcaccagaagcagctccaccgatacgtcctgcacgtct
tatggctacaaggccaccagcaactggacggtcgccggcctgagcagtttcgggtctgga
ggcacaccttatccgttcttcatcgccaaggatgcttccggcaatgtgcagccgatcacg
tcggcgccccagctcttcaccggcccgatcgtgaacagcaaggaaacgttctacgtactg
gtgggcacgggcaagtacctggaatcatcggaccggacttccacccgggctcagagcgta
tatgcgctctacgataacggatccaccacggcggactcttccaaccccacgtctgccata
tccgggcgcagccggatgactgcaggcacggtgagcacctcggcgcaaacggtgacggtt
cccagcttcaaatggggaaggccccagagcgacggagacactacccagcgtgccggctgg
tatatcgatctgccgacttccggggagcgatccatcagcggtttcaccgatctgggcggg
ctgacggtggcattcagcacggtcattcccggagatgtcgcctctgcgggcgcctgtgac
gccaatccgggctccggccgccaatacaccctggatgtctccctcggcaatggctccact
gccgaatccagggtgggcctgctgagcgcattcgtggtgatcgaggacaccgccagttcc
acggtgaccaattacgatagcactggccaggcgattcgcacgatcatgaagcgcagcctg
cagaccggctcctcgggtgttaccgaaggcaagagcaccacagtgcaggaggtggtcggc
cggctcagctggcggcagatctacgattaccggcaactgcgcaaggacgcgacaacccca
tga
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