Acidovorax sacchari: AVXHC19_37780
Help
Entry
AVXHC19_37780 CDS
T10802
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asah Acidovorax sacchari
Pathway
asah03410
Base excision repair
asah03430
Mismatch repair
asah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVXHC19_37780 (recJ)
03430 Mismatch repair
AVXHC19_37780 (recJ)
03440 Homologous recombination
AVXHC19_37780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_37780 (recJ)
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AVXHC19_37780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AVXHC19_37780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AVXHC19_37780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BFO56975
LinkDB
All DBs
Position
4274720..4276435
Genome browser
AA seq
571 aa
AA seq
DB search
MKIVARDIPPRAVWALEQAGVHPLLARLYAARGVTAHDQLDDALARLLPPPGLRGMREAA
ALLADAIAQDRRIVVVADYDCDGATACAVAVRGLRLLGARQVDYLVPDRIADGYGLSPAI
ARRVRERGADLLVTVDNGIASVEGVAEAKALGLSVLVTDHHLPGPELPQADAIVNPNQPG
CSFESKSIAGVGVMFYVLMALRAELRERGVFDKASQPKLEPLLPLVALGTVADVVRLDAN
NRRLVAQGLKRIRAGHMPAGIAALFDAAGRKAAVATTFDFGFALGPRINAAGRLADMTLG
IECLLTDDPGRAAELARTLDAINRERREIEGGMREQALLMAESLFGENDEPPAAVSVWDP
DFHEGVVGIVASRIKDRLHRPTFVFATSSAPGKEDEIKGSGRSIPGFHLRDALDLVAKRH
PGVILKFGGHAMAAGCTVAKDQFPVFERAFAQVAQEWLDAATLMRRLDTDGPLSPEYCRA
ELVDTLHREVWGQGFAPPTFSEEVEIVSQRLVGEGKNHLSLKLLHQGRPVDGIWFGHTEP
LPARVLLAFRLDVNEWKGERRVQFLVEGAQL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtggcccgggacattccgccccgcgccgtgtgggcgctggagcaggcgggc
gtgcatccgctgctcgcgcggctgtacgcggcgcgcggcgtgaccgcccacgaccagctc
gacgacgcgctggcgcggctgctgccgccgccgggtttgcggggcatgcgcgaggccgcg
gcactgctggccgatgcgatcgcgcaggaccggcgcatcgtcgtggtggccgactacgac
tgcgacggcgccaccgcgtgcgccgtggcggtgcgcggcctgcggctgctgggtgcccgc
caggtggactacctggtgcccgaccgcatcgccgacggctacggcctgagcccggccatc
gcgcgccgcgtgcgcgaacgcggggccgacctgctggtcacggtggacaacggcatcgcc
agcgtggagggcgtggccgaggccaaggcgctgggcctctcggtgctggtcacggaccac
caccttcccggcccggaactgccgcaggccgatgccatcgtgaaccccaaccagccgggc
tgcagcttcgagagcaagtccatcgccggcgtgggcgtgatgttctacgtgctgatggcg
ctgcgcgcggaactgcgcgaacgcggcgtgttcgacaaggccagccagccgaagctggag
ccgctgctgcccctggtcgccctgggcacggtggccgacgtggtgcggctggacgcgaac
aaccggcgcctggtggcgcaggggctcaagcgcatccgcgcgggccacatgccggcgggc
atcgcggcgctgttcgacgcggcgggccgcaaggcggccgtggcgacgaccttcgatttc
gggttcgcgctgggcccgcgcatcaacgcggccgggcgcctcgcggacatgacgctgggc
atcgaatgcctgctgaccgacgacccgggccgggccgcggaactggcgcgcacgctcgac
gccatcaaccgcgagcggcgcgagatcgaaggcggcatgcgcgagcaggccctgctgatg
gccgagagcctgttcggcgagaacgacgagccgccggccgcggtgagcgtgtgggacccg
gacttccacgagggcgtggtcggcatcgtggcctcgcgcatcaaggaccggctgcaccgg
ccgaccttcgtgttcgccaccagcagcgcgcccggcaaggaagacgagatcaagggctcg
ggccgctccattcccggcttccacctgcgcgacgcgctggacctggtggccaagcgccat
ccgggcgtgatcctgaaattcggcggccacgcgatggcggccggctgcaccgtggcgaag
gaccagtttccggtgttcgagcgcgcgttcgcccaggtggcgcaggagtggctggatgcc
gccacgctcatgcgccggctcgacaccgacggaccgctctcgccggagtactgccgcgcc
gaactcgtggacacgctgcaccgcgaggtctggggccagggcttcgcgccgccgactttc
agcgaggaggtggagatcgtgagccagcgcctcgtgggcgaagggaagaaccacctgtcg
ctcaagctgctgcaccagggccgaccggtggacggcatctggttcggccacacggagccg
cttccggcgcgcgtgctgctggcgttccggctcgacgtgaacgagtggaagggagagcgg
cgggtgcagttcctggtggagggcgcccagctctga
DBGET
integrated database retrieval system
