Acidovorax sacchari: AVXHC19_40650
Help
Entry
AVXHC19_40650 CDS
T10802
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asah Acidovorax sacchari
Pathway
asah03018
RNA degradation
Brite
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVXHC19_40650
Messenger RNA biogenesis [BR:
asah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AVXHC19_40650
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AVXHC19_40650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFO57262
LinkDB
All DBs
Position
4636344..4638245
Genome browser
AA seq
633 aa
AA seq
DB search
MPSSTSQAAARRPPSQARIQAALKQSFGLRALRPGQRDVIDRVLRGENTLAIMPTGAGKS
LCYQLPALLLAGRTVVVSPLIALMRDQCDALRERGVPAVQLHSALDAEETRAAEAAVADG
SARIVLTTPERLADSGFQALLEAGGPVDLLAVDEAHCISQWGHDFRPAFLDIAQAVPRLG
RPTVLALTATAAGPVAQDIRRQLGIPAAGVVDTGTYRPNLHYRAEQLADEKEKRDCLLRT
VKGTEGSGIVYTATVKAAEEVHALLAGAGESAGLYHGRMPAAERGEAQDRFMAGDLRVMV
ATNAFGLGIDKQDVRFVIHYQMPGGLDAYYQESGRAGRDGQPAHCILLFLRKDKAVQQFF
LAGRYPTPDDLDALYGALQSPPPGAHEGWTLDLLQQALDRPRSKLQVALGLLRRRRIVTQ
KADGRLALRRADIDSDALIALLEDYAQKRTQDQDGLERMVFYAQTGGCRWEVLLDYFGHA
RDTHRCGTCDNCRRIAALDAQQAIANAAASAAAAPTAGPSARPPAGVAARRKPSEVAAIA
APSPAEVLAATAPAASAAAARPVFELGMPVRVKRYGEGTVRAIASESITVSFADGTERCF
HPEYVRKARRRRAAANDAEVPLAAGPALALRSA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatccacctcccaggctgccgccaggcggcctcccagccaggcccgcatccag
gcggccctgaagcaatccttcggcctgcgcgccctgcgcccgggccagcgcgatgtgatc
gaccgcgtgctgcgcggcgagaacacgctggccatcatgcccacgggcgccggcaagtcg
ctgtgctaccagttgcccgcactgctgctcgcgggccgcacggtggtggtgtcgccgctg
atcgcgctcatgcgcgaccagtgcgacgccctgcgcgagcgcggcgtgccggccgtgcag
ttgcacagcgcgctggacgccgaggaaacgcgcgcggccgaggcggccgtggccgacggc
agcgcgcgcatcgtgctcaccacgcccgaacgcctggcggacagcggcttccaggcgctg
ctcgaagccggtggccccgtggacctgctggccgtggacgaggcgcactgcatctcgcaa
tggggccacgacttccgtcccgcattcctcgacatcgcccaggccgtgccgcgcctgggc
cgcccgacggtgctcgcgctcaccgcgaccgccgcaggcccggtggcacaggacatccgc
cggcagctgggcattccggccgcgggcgtggtcgataccggcacctatcgccccaacctg
cactaccgcgccgaacagctcgccgacgaaaaggaaaagcgcgactgcctgctgcgcacc
gtgaagggcaccgagggctccggcatcgtctataccgccaccgtgaaggccgcggaggaa
gtgcatgcgctgctggccggtgcgggcgaatccgcgggcctctaccacggccgcatgccc
gccgccgagcgcggcgaggcgcaggaccgcttcatggcaggcgacctgcgcgtgatggtc
gccaccaacgctttcggcctgggcatcgacaagcaggacgtgcgcttcgtgatccattac
cagatgcccggcggactggacgcgtattaccaggaatctggccgggccgggcgcgacggc
cagccggcacactgcatcctcctgttcctgcgcaaggacaaggcggtacagcagttcttc
ctggccggccgctaccccacgccggacgacctcgacgcgctgtacggcgcgctgcagtcc
ccgccgcccggcgcgcacgagggctggacgctcgacctgctgcaacaggccctcgaccgc
ccgcggtccaagctccaggtcgcgctcggcctgctgcgccgccgccgcatcgtgacgcag
aaggccgacggccgcctcgcgctgcgccgtgccgacatcgacagcgatgcgctcatcgcc
ctgctcgaagactacgcgcaaaagcgcacgcaggaccaggacgggctcgaacgcatggtg
ttctacgcgcagaccggcggctgccgctgggaggtgctgctggactacttcggccatgcg
cgcgacacgcaccgctgcggcacctgcgacaactgccggcgcatcgccgcgctggatgcg
cagcaggcgatcgcgaacgccgctgcatcggccgcagcggctcccacggccggcccgtcc
gcccgtccgcccgccggtgtggcggcccgccgcaagccgtcggaagtggcagccatcgcc
gctccgtcacccgctgaagtgctcgcggcgacggcgcccgccgcctctgccgccgccgcc
cgcccggtcttcgaactcggtatgcccgtgcgcgtgaagcgctatggcgaaggcaccgtg
cgcgcgatcgcgtcagaatctatcaccgtgtccttcgcggacggaaccgagcgctgcttc
cacccggaatacgtgcgcaaggcgcggcgtcgccgggcggcggccaatgatgccgaggtg
ccgctggctgcaggacccgcactggcgttgcgcagtgcctga
DBGET
integrated database retrieval system
