Acidovorax sacchari: AVXHC19_42030
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Entry
AVXHC19_42030 CDS
T10802
Name
(GenBank) transporter associated domain-containing protein
KO
K06189
hemolysin (HlyC) family protein
Organism
asah Acidovorax sacchari
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asah02000
]
AVXHC19_42030
Transporters [BR:
asah02000
]
Other transporters
Pores ion channels [TC:
1
]
AVXHC19_42030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CorC_HlyC
CBS
NMB0537_N
Motif
Other DBs
NCBI-ProteinID:
BFO57400
LinkDB
All DBs
Position
complement(4788906..4789790)
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AA seq
294 aa
AA seq
DB search
MSDPHPARPSDREDKRTLLQRLIEFIHPGPDSKDELIATLAEAEDNDVINADARVMLERV
LRMAEMTASDVMVPAPRMDLIDIDQPFETLLHQVIDTAHSRFPVYQGERENIIGILMAKD
LLKLQRAPELNLRALLRSVVYVPESKGLNDLLREFRANRIHMAVVIDEFGRVAGLVTIED
VLEQIVGEIEDEFDIPEDEGDIFALADRTYRVSGDTPVERVAEAFDLPALEGSDRDEEFE
TIGGLIAHELGHAPRRGESLDLGGLRFVVLHTKGGAVRWFKVSPQPPGAEPDAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacccccaccctgcgcgcccctccgaccgcgaagacaagcgcacgctcctgcag
cgcctcatcgagttcatccatcccggccccgattccaaggatgaactgatcgccaccctg
gccgaggcggaggacaacgacgtcatcaatgccgatgcgcgcgtgatgctcgaacgcgtc
ctgcgcatggccgagatgacggccagcgacgtgatggtgcccgcgccgcgcatggacctg
atcgacatcgaccagccattcgagacgctgctgcaccaggtgatcgacaccgcccattcg
cggttcccggtgtaccagggggagcgcgagaacatcatcggcatcctcatggcgaaggac
ctgctcaagctgcagcgggcgcccgagttgaacctccgggcgctgctgcgctccgtggtg
tacgtgcccgagagcaaggggctgaacgacctgctgcgcgagttccgcgccaaccgcatc
cacatggcggtggtgatcgacgagttcggccgggtggccgggctggtcaccatcgaggac
gtgctcgagcagatcgtgggcgagatcgaggacgaattcgacatccccgaggacgaaggc
gacatcttcgccctggcggaccggacctaccgcgtgagcggcgacacgcccgtggagcgc
gtggccgaggccttcgacctgcccgccctcgagggctccgacagggacgaggagttcgag
accatcggcggcctgatcgcgcacgagctgggccatgcgccgcgccgcggggaatcgctg
gatctcggcggcctgcgcttcgtggtgctgcacaccaagggtggcgcggtgcgctggttc
aaggtctcgccgcagcccccgggcgccgaaccggacgccggctga
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