Acidovorax sacchari: AVXHC19_45320
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Entry
AVXHC19_45320 CDS
T10802
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
asah Acidovorax sacchari
Pathway
asah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVXHC19_45320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asah03400
]
AVXHC19_45320
Enzymes [BR:
asah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVXHC19_45320
DNA repair and recombination proteins [BR:
asah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVXHC19_45320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
SopE_GEF
AAA_30
ADDB_N
AAA_22
AAA_16
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BFO57729
UniProt:
A0ACD8IBD2
LinkDB
All DBs
Position
5155766..5157991
Genome browser
AA seq
741 aa
AA seq
DB search
MRQTRAPPRPSPPDPSVSQPLSQPTSAASPPAVTTGGTIVSVAVQTPAHSAVGGPLSYAS
AHPLEPGTLVRVPLGTREVLGVVWDAPADAPELPRGAAVRPVAGVLEGLAPLDAAWRRLV
AFAARYYQRALGEVALAALPPQLRDLTPAQLARRLRRAPAATAGEAAPPYAPGPHALSAE
QQAATDAIAARPGPFLLYGSTGSGKTEVYLRCVQQALAADPAAQVLVMVPEINLTPQLEA
RFLARFAPLYGADSVVSLHSGMTHPQRLKSWLAAHAGQARIVLGTRMAVFASLPGLALIV
VDEEHDASYKQQEGARYSARDLAIWRGREQGAKVILGSATPSLESWHASRPPADGDPGGR
YLRLHMPSRIGAGALPRVRLVDMAQQPRGAVFSPPLVAAITERVERGEQCLVLLNRRGFA
PVLHCTECGWKSDCPHCSAHQVFHKIDRSLRCHHCGFAQRVPYACPGCGNPDIAPIGRGT
EQLEEQLAALLRNVITPERRAARVARIDADTTKAKGALEEQLAQVHAGEVDVLVGTQMVA
KGHDFRRITLVAAVQPDGALFSSDFRAPERLFALLMQAAGRAGRDAGYVAAQGGACEMWV
QTYHPDHAVYAALRRHDYPAFAARQLAERAEAAMPPFAFQALVRADARTQEVAQAFLAGC
AEAARQAGLPGLEQVTVFPPVPLAIQRVANVERAQMLLESPSRAALQRFLAAWQPLLHAC
RADPAHRGLVRWLVDVDPLAI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcagactcgggcgccgccccggccctcgccccccgacccttccgtgtcccagccc
ctctcccagcccacgtccgccgcatcgccacccgccgtgaccaccggcggcacgatcgtc
tcggttgccgtccagacccccgcgcacagcgcggtgggcggtccgctgagctatgcgagc
gcacacccgctggagccgggcacgctggtgcgggtgcccctgggcacgcgcgaagtgctg
ggcgtggtgtgggatgcgccggccgacgcgccggagctgccgcgcggcgccgcggtgcgg
ccggtggcgggcgtgctggaggggctggcgccgctggacgcggcctggcggcggctggtg
gccttcgcggcgcgctactaccagcgggcgctcggcgaggtggcgcttgccgccctgccg
ccgcagctgcgcgacctcacgcccgcgcagctcgctcggcgcctgcggcgtgcgccggcc
gccacggccggggaagccgcgccgccctatgcgcccgggccccatgccctgagcgccgag
cagcaggcggccacggacgccatcgctgcccggcctggccccttcctgctctacggcagc
acgggcagcggcaagaccgaggtgtacctgcgctgcgtgcagcaggccctggcagccgac
cccgccgcccaggtgctggtgatggtgccggagatcaacctcacgccgcagctggaggcg
cggttcctggcgcgcttcgcgccgctctacggggccgacagcgtggtctcgctgcacagc
ggcatgacccacccgcagcggctgaaaagctggctggccgcgcacgcaggccaggcgcgc
atcgtgctgggcacgcgcatggcggtgttcgcgagcctgccgggcctggcgctcatcgtg
gtggacgaggagcacgacgccagctacaagcagcaggagggcgcgcgctattccgcccgc
gacctggccatctggcgcgggcgcgagcagggcgccaaggtgatcctcggctcggccacg
ccgtcgctcgagagctggcacgcgagccgcccgcccgcagacggggacccgggcgggcgc
tacctgcggctgcacatgcccagccggatcggcgcgggcgcactgccgcgcgtgcggctg
gtggacatggcgcagcaaccgcgcggcgccgtgttctcgccgccgctcgtggccgccatc
accgagcgcgtggagcgcggcgagcagtgcctggtgctgctcaaccgccgcggcttcgcc
ccggtgctgcactgcacggaatgcggctggaagagcgactgcccgcactgcagcgcccac
caggtgttccacaagatcgaccgttcgctgcgctgccaccactgcgggttcgcgcagcgc
gtgccctatgcctgcccgggttgcggcaacccggacatcgccccgatcgggcgcggcacc
gagcaactggaagagcagttggccgccttgctgcgcaacgtgatcacgccggagcgccgc
gccgcgcgcgtggcccgcatcgacgccgacaccacgaaagccaagggcgcgctggaagag
cagctcgcccaggtgcatgcaggcgaggtggacgtgctggtgggcacgcagatggtcgcc
aaggggcatgatttccggcgcatcacgctggtggcggcagtgcagccggacggcgcgctg
ttctccagcgatttccgggcgcccgagcggctgttcgcgctgctcatgcaggcggcgggc
cgcgccggccgggacgcgggctacgtcgccgcccagggcggcgcctgcgagatgtgggtg
cagacctaccaccccgaccatgccgtgtacgcggcgctgcgccggcacgactacccggcc
ttcgccgcgcggcagctcgccgagcgcgccgaggccgccatgccgcccttcgcgttccag
gcgctggtgcgtgccgacgcgcgcacgcaggaggtggcgcaggccttcctggccggatgc
gccgaggcagcccggcaggcgggccttccggggctggagcaggtgacggtgttcccgccc
gtgcccctggcgatccagcgcgtggccaacgtggagcgcgcgcagatgctgctggagagc
ccgagccgcgcggcgctgcagcgcttcctggcggcctggcagccgctgctgcacgcctgc
cgcgcggacccggcgcaccgggggctggtgcgctggctggtggacgtggatccgctggcg
atctga
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