Agrobacterium salinitolerans: CFBP5507_04915
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Entry
CFBP5507_04915 CDS
T08921
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asal
Agrobacterium salinitolerans
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asal03032
]
CFBP5507_04915 (topA)
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_04915 (topA)
Enzymes [BR:
asal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFBP5507_04915 (topA)
DNA replication proteins [BR:
asal03032
]
Prokaryotic type
DNA Topoisomerases
CFBP5507_04915 (topA)
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFBP5507_04915 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
UYZ08349
UniProt:
A0A4Z1R5K1
LinkDB
All DBs
Position
Circular:complement(997358..1000042)
Genome browser
AA seq
894 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMSWEVDSASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDLLKKKRVLGDKPVKRVVFNAITKKAV
LDAMANPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNISALLKTPRGDEFEAKLVSADGKRLQNRSIKTGDDANRLKALLEGA
TYVVDTVEAKPVKRNPGPPFTTSTLQQAASSRMGFGASRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMAPEAIDAARKAIGEQFGDRYVPEKARFYSTKAKNAQEAHEAIRPTDFNR
TPDQVKRYLDADQLRLYDLIWKRGIASQMASAEIERTTVEILATNGGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDDEGRLPPINERENLAKQKINASQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLKTLSDREYIVVDKRKLIPHSRGRLVTAFLESFFTKYVEYDFT
AALEEKLDRISAGELDWKQVLRDFWKDFFAQIEDTKELRVTNVLDALNEVLAPLVFPKRE
DSSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNFTRQLTSDGSEAEASVSNEPKALG
ADPMTGEELTLRSGRFGPYIQRGDGKEAKRSSLPKGWKPEDIDHEKALALINLPRDIGKH
PETAKMISAGLGRYGPFLLHDGSYANLESIEDVFSIGLNRAVTVIAEKQSKGPGRGRSGT
PAALKELGDHPDGGAITVRDGRYGAYVNWGKVNATIPKGQDPASVTLDEALVLIAERIAK
TGTGGKPAKGRKTAAKKADGDAAATPKATKAKAATKSKAAAKPKAAAKPKKAAE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtcgtcgtagaatctcctgccaaagccaagacgatcaataagtatcttggc
tcgggctataaggttcttgcatcctttggccacgtcagagaccttcctgccaaggacgga
tcggtgctgcccgatcaggatttcgaaatgtcctgggaggtcgatagcgcgtccgccaaa
cgcatgaaggatattgccgatgcggtaaaatcctccgacggcctttttctcgcaaccgac
ccggatcgcgaaggcgaagccatttcctggcacgttctcgatctcctgaagaagaagcgt
gtgcttggcgacaagccggtgaagcgcgtggtcttcaacgccatcaccaagaaggcggtt
ctggacgccatggccaacccgcgcgacatcgatgtgccgctggtcgacgcctatctcgcc
cgccgtgcgctggattatctcgtcggtttcaacctctccccggtcctgtggcgcaagctg
cccggcgcgcgttccgccggccgcgtccagtcggtggcgctgcgcctcgtctgcgaccgc
gaatccgagattgagcgtttcatttccgaagaatactggaacatcagcgcgcttctgaag
acaccgcgcggtgacgagttcgaagccaagctggtttcggccgatggcaagcgcctgcaa
aaccgctcgatcaagaccggagacgatgcgaaccggctgaaggcgctgctggaaggcgcg
acctatgtcgtggatacggtcgaggcgaagccggtcaagcgtaatcccggcccgcccttc
accacctcgacgctgcagcaggccgcgtcttcgcgcatgggctttggcgcctcgcgcacc
atgcaggtggcgcagaagctttatgaaggtatcgatatcggcggcgagaccgtcggtctg
atcacctatatgcgtaccgacggcgtacagatggccccggaagcgatcgatgccgcccga
aaggccattggcgagcagttcggcgaccgttatgtgccggaaaaggcgcgcttttactcc
accaaggcaaaaaacgcccaggaagcgcacgaagcaatccgcccgaccgatttcaaccgc
acgccggatcaggtgaagcgttacctcgatgccgatcagttgcgtctttacgatctgatc
tggaagcgcggtatcgccagccagatggcgtcggcagaaatcgagcgtaccacagtggaa
atccttgccaccaatggcggcgagaaggctggcctgcgcgccgttggctctgtcatccgc
ttcgacggctttatcgccgcctataccgaccagaaggaagatggcgagcagagcgacgat
ggtgacgatgaaggccgtctgccgccgatcaatgagcgcgagaacctcgccaagcagaag
atcaacgccagccagcacttcaccgaaccgccgccgcgttattcggaagcctcgcttatc
aagaagatggaagaactcggcatcggccgtccttccacctatgctgcgacgctgaagacg
ctgagcgaccgcgaatatatcgtcgtcgacaagcgcaagctgatcccgcattcgcgcggc
cggctggtgacggctttcctcgaaagcttctttaccaaatacgtcgaatatgatttcacc
gccgcccttgaagaaaagctcgaccgcatctccgccggcgagttagactggaagcaggtt
ctgcgtgatttctggaaggatttcttcgcccagatcgaagacaccaaggaactgcgtgtc
accaacgttctggatgcgctgaacgaggttctggcgccgctggtcttccccaagcgcgag
gatagctccgatccgcgcatctgtcaggtttgcggcaccggcaatctttcgctgaagctc
ggcaaatacggcgctttcgtcggttgctccaactatccggagtgcaactttacccgccag
ctcacctccgatggctcggaagccgaagcttccgtgtccaacgagccgaaagcactcggt
gccgatccgatgaccggcgaagagctgacgctgcgctctggccgtttcgggccttacatc
cagcgcggtgacggtaaggaggccaagcgctcctcgctgcccaagggctggaagcctgaa
gatatcgaccacgaaaaggccttggcgctcatcaatctgccccgcgatatcggcaagcac
ccggagacggccaagatgatctccgccggcctcggccgctatgggccgttcctgctgcat
gatggttcctatgcgaaccttgaaagcatcgaggacgtgttctcgatcggtctcaaccga
gccgtgaccgttattgccgaaaagcagagcaagggaccaggacgcggccgcagcggcacg
ccggctgctctcaaggaactgggcgaccatcccgatggcggcgccatcaccgtccgcgac
gggcggtatggcgcttacgtcaactggggcaaggtcaatgccaccattccgaaggggcag
gatccggcttccgtgacgctggacgaggcgctggtgctgattgccgagcgcattgccaag
accggcaccggcggcaagcctgccaagggcaggaagacggctgccaagaaggccgatggt
gacgccgcggccacgccgaaggcgaccaaggccaaggcggcaaccaagagcaaggcggcc
gccaagccgaaggcagcggccaaacccaagaaggcagcagagtga
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