Agrobacterium salinitolerans: CFBP5507_08500
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Entry
CFBP5507_08500 CDS
T08921
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFBP5507_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asal03021
]
CFBP5507_08500
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_08500
Enzymes [BR:
asal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFBP5507_08500
Transcription machinery [BR:
asal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFBP5507_08500
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFBP5507_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UYZ06298
UniProt:
A0A1S9EKJ0
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All DBs
Position
Circular:complement(1693787..1694797)
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AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctggttgccgagccgctggagcgtggtttcggtcttaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgtggcgccgctgtaacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggacggcgatgattccaagcgc
atggtcgtgcgcaagcagggtccgggtgccgtaaccgctggtgacatccagacggttggc
gacatcgaaatcctgaaccccgaccacgtgatctgcacgctggacgatggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgtgcg
gaagatgcccctatcggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactacgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgcatt
cttcaggaccagctgggcgtcttcgtcaactttgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaacttgcgttcaacccggcgcttctcaagaaggtcgacgagctcgag
ctgtccgttcgttcggcaaattgcctgaagaacgacaacatcgtttatatcggcgacctg
atccagaagaccgaggccgaaatgcttcgcacgccgaacttcggtcgcaagtcgcttaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtgccggcatgg
ccgcctgagaacatcgaagatctcgcaaagcgttacgaagaccagtactaa
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