Agrobacterium salinitolerans: CFBP5507_09090
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Entry
CFBP5507_09090 CDS
T08921
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03420
Nucleotide excision repair
asal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP5507_09090
03430 Mismatch repair
CFBP5507_09090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_09090
Enzymes [BR:
asal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP5507_09090
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5507_09090
MMR (mismatch excision repair)
Other MMR factors
CFBP5507_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UYZ06408
UniProt:
A0A4Z1RBP3
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All DBs
Position
Circular:1800742..1803216
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AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPTAPRRATNNAGAESGGGLGIAARAMAARDQTRAAPDYLSGLNPEQ
RDAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQLAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLMHPISIFRRNTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESMRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKADPFTNN
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADKPSKF
FVGDRVFHIKFGNGNISAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgatgaggaacccaccgcaccgcgcagg
gcaacgaacaacgccggtgcggaaagcggcggcgggcttggcattgctgcccgcgccatg
gcggcgcgcgatcagacgcgtgctgcacccgactatctttccggcctcaacccggagcag
cgcgatgccgtggaaacgctggacggacccgttctcgtcctcgccggcgccggcaccggc
aagacccgcgttctgaccacccgcatcgcccatattctcgcgaccggccgggcctatccg
agccagattcttgccgtgacctttaccaacaaggctgcccgcgagatgaaggaacgtatc
ggcgttctcgtcggtggcgcggtcgagggcatgccctggctcggcacgttccactccatc
ggcgtcaagctgttgcggcgtcacgccgaactcgtcggcctgaaatcggatttcaccatc
ctcgatacggacgacgtggtgcggctgatcaagcagctcattcaggccgaaggtcttgat
gacaagcgctggccggcaaaacagctcgccggcatgatcgacggctggaagaacaagggc
ctgacgccgccggatattcctgaaggggacagccgcgccttcgcaaatggcaaaggtcgt
gaactttacaccgcctatcagaaccgcctgaaaacgctgaacgcctgcgacttcggcgac
cttctgatgcacccgatcagcatcttccgccgcaacacggatattctgaaggagtatcac
cagaaattccgttacattctggtggacgaatatcaggacaccaatacggcgcaatatatg
tggctcaggcttcttgcccagcgcgccaagggcgagccgcaaaacgtctgctgtgtcggc
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaacatcctccgcttc
gacaaggatttccccggcgccaaggtgatcaagctcgagcgcaactaccgttccaccgag
catattctcggcgctgccggccatctgatcgcccacaacgagggccgtctcggcaagacg
ctgtttactgagcgcagcagccctgacgatgaaaaggtcgtggtgcacgcagcctgggat
tccgaagaggaagcccgcgcggtgggcgaggaaatcgaacagctacagcgcaagaaccac
aagctgaacgacatggcgatcctcgttcgcgcttccttccagatgcgcgaattcgaagac
cgtttcgtcacgctcggcctcaattaccgcgtcatcggcggcccgcgcttttatgagcgt
ctcgaaatccgcgatgccatggcctatttccgcctcgtctgccagccggccgacgatctg
gccttcgagcggatcatcaacacgccgaaacgcggccttggtgacacgaccatccgcaac
ctgcacgactatgcccgcgcccgcgatattccgatgctggcggccgcggccgatatcatc
gaaaccgacgagctgaagccgaaggcgcgcaaggcgctgttcgatgtggtgcaggatttc
cgccgctggcagggcctcttggaaaacaccgaacacaccacgcttgccgagcagattctc
gacgaaagcggctataccgccatgtggcaggccgacaagacggcagaagcccccggacgc
cttgagaacctgaaggaactcatccgctcgatggaagcctttgaaagcatgcgcggattc
ctcgagcatgtcgcactcgtgatggatgccgagcaaaacgaaaatctcgatgccgtctcc
atcatgacgctgcactccgccaagggtctggaattcgacaccgtcttcctgcccggctgg
gaagaaggcctgttcccgcaccagcgggcgctggacgaaggcgggcgctccggtcttgag
gaagaacgtcgccttgcctatgtcggtatcacccgtgccaagaaactctgccatatctgg
ttcgtgtcgaaccggcgcattcacgggctgtggcaatccaccctgccctcacgtttcctc
gatgaattgccgcccgcccatgtggatgtcgcggcatccgatagcaattacggcggttat
ggcggacgtggcggctacggccagtcgcgcttcgacaaggccgatcccttcactaacaac
tactccacccccggctggaagcgcgcgcagcagaaccgcagcgacgccacccgcgacaat
tggggcacccgctccggccatgcggtggaacggatcggttatggcgaaagcggcccgcgc
acccgcactatagatggcgaactggtggccaaatccgtggctgacaagccctcgaaattc
ttcgtcggcgaccgcgttttccacatcaagttcggcaatggcaatatttccgccatcgag
ggcaacaagctgaccatcgacttcgatcgcgccggccagaagcgcgtgctggatggattt
gtggaaaaggtttga
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