Agrobacterium salinitolerans: CFBP5507_09655
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Entry
CFBP5507_09655 CDS
T08921
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBP5507_09655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_09655
Enzymes [BR:
asal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFBP5507_09655
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFBP5507_09655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
UYZ08889
UniProt:
A0A4Z1R198
LinkDB
All DBs
Position
Circular:complement(1929926..1931374)
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AA seq
482 aa
AA seq
DB search
MYCPVLEGRGDFGEWRDAARAALAADIRPETIDWRLQDCGAGLLDFAGEPLPTVDAGNGQ
VSVPASFLALAQAVICHGDPGRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRR
DCHKMTAFVRFKELCLPQGQGGRRRFVAWFEPDHFIVERTAAFFQRRFTDMDWLIATPKG
SARWDGSELQTSREAAAKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EADLIPDLILGAEARVLEMAARTASQPQPFHHRLQAAAAAREMPQLAPDGTLASLARQAG
HCTRCPLHCSATQTVFGSGPEDAEIMIVGEQPGDHDDLAGKPFVGPAGQLFDRTLADVGI
ERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWLNQEIALVRPKLIVAMGATAL
YALTGGKERLSEIRGRPIPMEEGRTLFVTVHPSYLLRLAGGRAKEAEMTRFVEDIKFIRI
FE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcccggtgctggaagggcggggcgatttcggcgagtggcgcgatgccgcgcgt
gcggcccttgccgccgatattcgaccggagacgattgactggcggttgcaggattgcggg
gcagggctgctggatttcgccggtgagccattaccgacggtcgatgccggcaatgggcag
gtttccgttccggcctcgtttttggcgctggcacaggccgtcatctgccatggcgatccc
ggccggtttgcgctgctttaccgtttgttgtggcggctgaagcgggatcgcgccctgttg
cagttcaagtctgatccggatgttgcagaggcccgtttgctcgagaaatcggtgcgtcgg
gattgtcacaagatgacggccttcgtccgtttcaaggagttgtgcttgccgcaggggcag
ggcgggcgacggcggttcgtggcctggttcgagccggatcatttcatcgtcgagcgaacg
gcagcatttttccagcgacggtttaccgatatggactggctgatcgccacgccgaaaggg
tccgcccgatgggatggaagcgagctgcaaacctctcgggaggcggcggcgaagcccgat
ctgacggacgagacggatgaactctggcgaacttattatgccaatatattcaatccggcc
cgcttgaagattaaggccatgacggcggagatgccaaagaaatactggaagaacctgccg
gaagccgatctcattccggacctcattctcggtgcggaggcgcgggtactggaaatggcc
gccagaacggcgagccagccgcagccctttcaccatcgcctgcaggctgcggccgctgca
cgggagatgccgcaactggcgccagacggaacgcttgcgtcgctggcgcggcaggctggc
cactgtacccgctgtcccctgcattgcagcgccacgcaaacggttttcggttccgggccg
gaggatgcggaaatcatgatcgttggcgaacagccgggcgatcatgacgatctcgccgga
aagccttttgtcggcccggctggccagcttttcgaccggactcttgccgatgtcggtatt
gagcgcaaaaagctctacgtcaccaatgccgtcaaacacttcaaatatgaaacgcgcggc
aaacgacgcatccatcaacggccgaatgcaggcgaggtggagcaatgccgctggtggctc
aatcaggaaatcgcgctcgtccggccgaaactgatcgtcgccatgggcgcaactgcgctt
tatgcgctgaccggcggcaaagaaaggctctcggagatcaggggtcgtcctataccgatg
gaggagggccgaacgctttttgtcaccgtgcacccctcctatcttctgcgccttgctggt
gggcgggcgaaagaggcggaaatgacgcggttcgtcgaggatataaagtttattagaata
ttcgaatag
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