Agrobacterium salinitolerans: CFBP5507_12540
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Entry
CFBP5507_12540 CDS
T08921
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03030
DNA replication
asal03430
Mismatch repair
asal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5507_12540 (holA)
03430 Mismatch repair
CFBP5507_12540 (holA)
03440 Homologous recombination
CFBP5507_12540 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asal03032
]
CFBP5507_12540 (holA)
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_12540 (holA)
Enzymes [BR:
asal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5507_12540 (holA)
DNA replication proteins [BR:
asal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP5507_12540 (holA)
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP5507_12540 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
WH2
Motif
Other DBs
NCBI-ProteinID:
UYZ07051
UniProt:
A0A4Z1QKH1
LinkDB
All DBs
Position
Circular:2542698..2543735
Genome browser
AA seq
345 aa
AA seq
DB search
MTEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGVIAKKTGIDPDDAFASLKLTAS
DLQGDPGRLLDEVNAIGLFGGEKLVWVKGASSEKALVDALQILAETRPEASFLIIEAGDI
KKGTGLRKIAEPARSIAAIPCYADDARSLNTLIDQELSADNLRIAPAARQRLIESLGGDR
IASRNEIRKLALYCRGADVVEEDDVLAIIGDASTVSADDAVDAILKGDRNAFFHATQKIV
SSKTPIFLVLQGCLRQFQLLDQMRAEMDEKKLQAGQVMQTLGRHIHFRRKPIIERALRTW
QPAAIAREMNRLQAAILQSRQRQSLEESVALLTLLSTTLQSGRSG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgacggagataaagtcccatgaatttgagcgcttcgccgaaaacccggcggagcgcttt
cgtgttttcgtgctttacggcccggatcgcggtctcgtgtcggaacgcgcaggcgtcatc
gccaaaaagaccggtatcgatcccgatgacgctttcgcatcgctgaaactgaccgcatcc
gatctgcagggcgaccccggccgtctactcgacgaggtgaatgccatcggccttttcggc
ggcgaaaaactcgtctgggttaaaggtgcttcgtccgaaaaggcgctggtggacgccctc
cagattctggcggaaacgcgaccggaagcgagcttcctcatcatcgaagcaggcgacatc
aagaagggtacgggactgcgcaagatcgccgaaccagcgcgctccatcgcagccatcccc
tgctatgccgacgatgcgcgctcgttgaacacattgatcgatcaggaactctcagccgat
aatctgcgtattgcgccggccgcacggcagaggctgatcgaatcccttggcggcgaccgt
atcgcctcgcgcaacgaaatccgcaaactggcgctctattgccgtggagccgacgtggtc
gaggaggacgatgtactggcgatcatcggagacgccagcacggtttccgccgacgatgct
gtcgacgccattctgaaaggcgacagaaacgccttcttccacgcgacgcagaagatcgtc
tcttcgaagaccccgatcttcctcgtcctccagggatgcctcaggcaattccagttgctc
gaccagatgagggccgaaatggatgagaaaaaactgcaggccggtcaggtcatgcagaca
cttgggcgccacattcatttccgcagaaaacccatcatcgaaagagcgctgcgaacatgg
cagccagcggcgatcgcccgcgagatgaaccgtctgcaggccgctatcctgcaaagccgt
cagcggcaaagcctggaggaaagcgtggcccttctgacattgctgtcgaccacgctgcaa
tccggccgcagcggatga
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