Agrobacterium salinitolerans: CFBP5507_13360
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Entry
CFBP5507_13360 CDS
T08921
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFBP5507_13360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asal03019
]
CFBP5507_13360 (pnp)
03016 Transfer RNA biogenesis [BR:
asal03016
]
CFBP5507_13360 (pnp)
Enzymes [BR:
asal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFBP5507_13360 (pnp)
Messenger RNA biogenesis [BR:
asal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFBP5507_13360 (pnp)
Transfer RNA biogenesis [BR:
asal03016
]
Prokaryotic type
tRNA degradation factors
CFBP5507_13360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UYZ07199
UniProt:
A0A1S9EU17
LinkDB
All DBs
Position
Circular:complement(2720602..2722749)
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AA seq
715 aa
AA seq
DB search
MFNQHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDVLSMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEEIMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLGLAETELRAAYKITEKAARYAAVDAVKAKVKAHFLPEEGEAKYTPEEIGAVFKH
LQAKIVRWNVLDTKSRIDGRDLSTVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGAIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVADKKKEDGEAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaacactccgtggaaatcgaatgggcaggccgcccgctgaagctcgagacc
ggcaaggttgcccgtcaggctgacggcgccgtcatcgcaacctacggcgagacgatggtt
ctcgcgactgtggtttccgcaaagtccccgaagccaggccaggacttcttcccgctcacc
gtcaactaccaggaaaagacctacgcagccggcaagatccctggcggctacttcaagcgc
gaaggccgcccgagcgaaaacgagaccctcgtttcgcgcctgatcgaccgcccgatccgc
ccgctcttccctgaaggctacaagaacgacacgcaggtcgtcgtcaccgttatccagcac
gatctggaaaacaatccggacgtcctatcgatggttgcggcttccgcagcgctgacgctc
tctggcgttcccttcatgggcccggttggcggcgcgcgcgttggctacatcaacggtgaa
tatgttcttaacccgcatctggacgaaatggacgagtctgttctcgatctcgtcgttgcc
ggtacgcaggacgccgttttgatggttgagtccgaggccaaggaactcaacgaagaaatc
atgctcggcgccgtcatgttcggtcatcgcggcttccagccggttatcgacgcgatcatc
aaactcgccgaagttgccgccaaggaaccgcgcgaattcgaaccggaagatttttccgct
ctcgaaaacgaaatgctcggtcttgctgaaaccgaactgcgcgccgcctacaagatcacc
gaaaaggccgcccgttacgccgccgtcgacgccgtcaaggccaaggtgaaggcacacttc
ctgccggaagaaggcgaagccaagtacacgccggaagaaatcggcgctgtcttcaagcac
cttcaggccaagatcgttcgctggaacgttctggacaccaagagccgcatcgacggccgc
gacctgtcgaccgttcgtccgatcgtttcggaagttggcctgctgccgcgtacccacggt
tcggcgctgttcacccgcggcgagacccaggcgatcgttgttgcgaccctcggcaccggc
gaagacgagcagtatgtcgacagcctcaccggcatgtacaaggaacgcttcctgctgcac
tataacttcccgccctactcggtcggcgaaacaggccgcatgggttccccgggccgtcgc
gaaatcggtcacggcaagctcgcatggcgcgctatccgcccgatgctgccgactgcagag
cagttcccatacacgctgcgcgttgtttccgaaatcaccgagtccaacggctcctcgtcg
atggcaaccgtttgcggcacctcgcttgcactgatggacgccggcgttccgctggcaaag
ccggttgccggtatcgccatgggcctgatcctcgaaggcgagcgctttgctgttctctcc
gatatcctcggtgacgaagaccacctcggcgacatggacttcaaggtcgcaggtacggcc
gacggcatcacctcgcttcagatggacatcaagatcgccggtatcaccgaagagatcatg
aagatcgctctcgagcaggcacagggtggccgcaagcacattctcggcgaaatggccaac
gccatcaccgagagccgcggccagctcggcgaatttgcaccgcgcatcgaagtcatgaac
attccggtcgacaagatccgtgaagtcatcggctccggcggcaaggtcattcgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcctct
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgcggaaccg
gaagtcggcgccatctatgaaggcactgttgtcaagaccgctgacttcggcgctttcgtc
aacttcttcggcgcgcgtgacggcctcgtccacatctcgcagctcgcttccgagcgtgtt
gccaagacctccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttc
gacgagcgcggcaaggttcgcctgtccatgaaggttgtcgaccaggcgaccggcaaggaa
gtcgttgcagacaagaagaaggaagacggcgaagccgctgccgaataa
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