Agrobacterium salinitolerans: CFBP5507_13490
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Entry
CFBP5507_13490 CDS
T08921
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03030
DNA replication
asal03410
Base excision repair
asal03420
Nucleotide excision repair
asal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5507_13490 (polA)
03410 Base excision repair
CFBP5507_13490 (polA)
03420 Nucleotide excision repair
CFBP5507_13490 (polA)
03440 Homologous recombination
CFBP5507_13490 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asal03032
]
CFBP5507_13490 (polA)
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_13490 (polA)
Enzymes [BR:
asal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5507_13490 (polA)
DNA replication proteins [BR:
asal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFBP5507_13490 (polA)
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CFBP5507_13490 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5507_13490 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
UYZ07223
UniProt:
A0A4Z1R170
LinkDB
All DBs
Position
Circular:2749067..2752051
Genome browser
AA seq
994 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVVEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARLSRQLVALRTDVPLDQSLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATETDAS
AIDPANVPVQWGAEAHGPDLDAPAAAVVKAGEAAADATGAPPRKATGEGSAPADLATARQ
ALFSAAKIDTTAYLTIRDLDTLDRWIAAARETGVVAFDTETTSLDPMQADLVGFSLAIAD
NGKDASGTDIRAAYVPLTHKTGSGGDLFSDGIKLAEGQVPFAEALERLKDLLEDEAVLKV
AQNLKYDYLLMKRHGVVMRSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIAYKDVAG
SGKSSVTFDFVDIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPLVPVLAH
MEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNIGSPKQLGDILFGRMGLPGG
SKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYIHPGTKRVHTS
YALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFITTPGHKLLSADYSQIELRVLAHVA
DIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLG
IARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPSVKAF
NERAAINAPIQGSAADIIRRAMVRIEPALEAEKLSARMLLQVHDELIFEVEEAEIEKTLP
VVVSVMENAAMPAISMRVPLKVDARAADNWDEAH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggttccggtttcattttccgggccttc
catgcaattccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtctcgggc
ttctgcaacatgttgtggaagcttctgaaggatgcccgcaacaccgatgtcggtgtgact
ccgacgcattttgcggtgattttcgactattcgtcgaagaccttccgcaacgaactttac
gatctctacaaggccaaccgtaccgcgccgccggaagatctggtgccgcaattcggcctg
atccgtgaggcgacgcgcgcctttaaccttccctgcattgagacggaaggctttgaggcg
gacgatatcatcgccacctatgcccggcaggccgaggcgatcggagccgatgtcaccatc
atctcctccgacaaggatctgatgcagctcgtcacggctaatgtacatatgtacgacgcc
atgaaggacaagcagatcggcgttccggacgttgtcgagaagtggggcgtaggcccggaa
aaaatgatcgacctgcaggcaatgacgggcgattcgactgataatgttcctggcattcct
ggcatcggcccgaagacggcggcgcaattgctggaggaatacggcgatctcgatacgctg
ctggcgcgggcaggcgaaatcaagcagcagaagcgtcgggaaaatatcatcgccaatgcg
gagcttgcccgcctttctagacagctcgtggcactcaggaccgatgtgccgctggatcag
tctctcgaagcgctggtgctcgaaccacagaacggcccgaaactgatcgccttcctgaaa
gcgatggagttcacgacgctgacacgccgggttgccgaggcgaccgaaaccgacgcttcc
gccatcgatcccgccaatgtgccggtacaatggggcgccgaagcccatggtcccgatctg
gatgcgccggctgccgccgtcgttaaggctggcgaagcggccgctgacgcgacgggcgct
ccgccaaggaaagcaacaggtgaaggtagcgcgcccgccgatcttgccacagcgcgacag
gcgcttttttccgccgccaagatcgatacgaccgcctatctgacgataagggaccttgac
acgctcgaccgctggatcgcggcggcccgggagacgggtgtcgtcgccttcgatacggaa
acgacctcgctcgacccgatgcaggcggacctggtcggtttttcgctggccattgccgat
aatggcaaggatgcctcgggcaccgatatccgcgccgcctatgttcccttgacccacaag
accggctcaggtggcgatctcttcagtgatggcatcaagctcgccgaagggcaggtgccc
tttgccgaagctctggagcgtctgaaggacctgcttgaggacgaggctgtcctcaaggtc
gcgcagaacctgaaatatgactatctgctgatgaagcgccatggcgtcgtcatgcggagc
ttcgacgacacgatgctgatttcttatgttctcgaggccggcaaggccacgcacggcatg
gattcgctgtccgaacgctggctcggccacacgccgatcgcctataaggacgttgcggga
tcgggtaagtcgagtgtcaccttcgattttgtcgacatcgacaaggccaccgcttatgct
gcggaagatgccgatgtgaccctgcggctctggatggcgctgaagccgaggcttgtctcg
gaacggctgaccaaggtttatgagcggctggaacgtcccctcgtgccggttttggcgcat
atggaagagcgcggcatcaccgtggaccgtcaaatcctgtcacgcctttccggcgaactc
gcccagaaggccgcatccttcgaagaggaaatctacgagctggcgggcgagcgcttcaac
atcggatcgccaaagcagctcggcgatattctgttcggcaggatgggtctgcccggcggc
tcgaaaaccaagaccggccaatggtcaacatcggcgcaggttctggaagatctggcagcg
gaaggtgccgaactgccgcgcaagatcgtcgactggcggcagctgacgaagttgaaatcg
acctatacagatgcgctgccgggatatatccatcccgggacgaagcgggtgcatacgtcc
tatgcgctcgcctccaccaccacgggacgcctgtcgtcgtcggagccgaaccttcagaac
atcccggtccgcactgccgaaggccgcaagattcgcacggccttcatcaccacgccagga
cacaagcttctgtcggccgactacagccagatcgaactgcgcgtgcttgcccatgtcgcc
gatattccgcagcttcggaacgcctttgaaaacggcatcgacattcatgccatgacggca
tcggaaatgttcggcgtgccggttgaaggcatgccgtcggaagtgcgccgccgcgccaag
gcgatcaatttcggcatcatctacggcatatccgccttcggtctcgccaatcagcttggt
atcgcccgctccgaagcaggcgactatatcaagaaatatttcgagcgttttcccggcatt
cgcgattacatggaagcgaccaaagccttcgcgcgcgaaaacggctatgtcgagacgatt
tttggccgccgcgcccattatccggaaatccgctcctccaatccttcggtaaaagccttc
aatgagcgcgcggccatcaacgcgccgatccagggctcggccgccgatatcatccgccgg
gccatggtccgcatcgagccggcgctggaggcggaaaagctttccgcccgcatgcttttg
caggtgcatgacgaactcatcttcgaagtcgaggaagcggaaatcgaaaagaccctgccg
gtcgtcgtctccgtcatggaaaatgcggccatgccggcgatttccatgagggtgccgctg
aaagtggacgcccgcgcggcggacaattgggatgaggcgcattga
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