Agrobacterium salinitolerans: CFBP5507_15330
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Entry
CFBP5507_15330 CDS
T08921
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
asal
Agrobacterium salinitolerans
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asal03000
]
CFBP5507_15330
Transcription factors [BR:
asal03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFBP5507_15330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
PAS
RWP-RK
HTH_1
AAA
HTH_AsnC-type
HTH_IclR
AAA_16
HTH_24
HTH_20
HTH_28
HTH_29
HTH_50
IclR
AAA_2
HTH_17
HTH_Tnp_ISL3
Torsin
TsaE
Motif
Other DBs
NCBI-ProteinID:
UYZ09091
UniProt:
A0A4Z1R5S8
LinkDB
All DBs
Position
Linear:136934..138817
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AA seq
627 aa
AA seq
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MGFSDHIQEIEHVGQGRNTGRDAVVLESWRRCLDTYQLDPAKAREAVIVSETCLREHRQR
AEDLVHIARSGLERLYRQVAEQNYVLLLSDQQGVTVEFLGDPSFNNNLRKAGLYLGSEWS
EPRAGTCAVGACIATGEALTIHQTDHFDVTHTPLSCTAAPIYDTQGALTAVLDISLLSSP
ILKTSQNMARHLVSSTVRRIELANLMASSRHDLVLRFAGAPEFLDVDPEAAVSVDGSGRI
TGMTHAAARLLAASRGLDWRMPERLLGERVEEFFEAGFDELASLTRSSLPQERRIVVKDG
TVLYAHAIEPQQRRSTMPLARLKFQPVMEEIGGDGPAVRNLRRKVEKLAPAKLPILLQGQ
TGTGKEHLARIIHDTSGVSGRFVAVNCAAIPEQLIESELFGYLPGAFTGALAKGRKGLVE
EAQGGTLFLDEIGDMPFAAQSRLLRVLAEGEILPVGGSTPQKVDFRVISASHRPLSDMVR
TGDFRQDLYYRLNAAVLTLPALSERDDFPWLLDKFLEKHGLPGRPLTLSNAARMLILGHS
WPGNIRELDNAIAFAAALCDDGVITAEDLPDHLASATSAPMIDSRGADLGALLAACNGNV
SEAARRLGIDRTTMHRRMRRLGIGKPH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttccgatcacatccaggaaatagagcacgtcggacagggcagaaataccggc
cgcgacgcggtggtgctagaatcttggcgacgttgtctcgatacctatcagcttgatccg
gccaaggcgcgagaagccgtcatcgtttccgagacatgcctgcgcgagcatcgtcagcgg
gcagaagacctcgtccacatcgcccgttccggcctggaacggctgtatcggcaggtggct
gagcagaattacgttctccttctgtcggatcaacagggagtgacggtagagtttctgggc
gacccgtcattcaacaacaatctgcgcaaggccgggctttacctcggctcggaatggtcg
gaaccgcgtgccggcacctgcgccgtcggcgcctgcatcgccaccggcgaagcgctgacg
atccaccagaccgatcattttgatgtgacgcatacgccgctttcctgcaccgcagccccg
atctacgatacgcagggggcattgacggcggtgctcgatatttcactcctaagttccccc
atcctcaagacgagccagaacatggcgcgtcatctggtttcatcgaccgtgcgaaggatc
gagctggcaaatctgatggccagcagccgccatgatctggtgctgcgctttgcgggcgcg
cccgaatttctggatgtcgaccccgaagccgccgtctccgtcgatggctccggccggatc
acgggcatgacgcacgccgccgcacgccttctcgccgcatcgcgcgggcttgactggcgc
atgccggaacgcctcctcggagagcgcgtggaggagtttttcgaggccggcttcgatgaa
ctcgcctccctcacccgatcaagcctgccgcaggagaggcgcatcgtcgtgaaggacggc
accgtgctttatgcgcacgcgatcgaaccgcagcagcgccggtcgaccatgccgcttgcc
cgtctgaaattccagccggttatggaagagatcggcggcgatgggccggcggtgcgaaac
ctcaggcgcaaggtggaaaaactggcgcctgcaaaattgccgatcctgctgcagggccag
accggaaccggcaaagaacatctcgcccgcatcattcacgacacaagcggcgtttccggc
cgcttcgtcgccgtcaattgcgccgccattcccgaacagctgatcgaaagcgaattgttc
ggttatctgccgggagccttcacgggggcgctggcgaaaggacgtaaggggctggtggag
gaggcgcagggcggaacacttttcctcgacgagatcggcgacatgccgtttgcggcgcaa
agccggctattgcgcgtattggccgaaggcgagatcctgcccgttggtggctccaccccc
cagaaggtggatttcagggtgatttctgcctcgcaccgcccgttgagcgacatggtgcgg
acaggtgatttccgccaagacctctattatcgcctgaatgcggctgtgttgaccttgcct
gcacttagcgagcgggatgacttcccctggcttctcgataagtttctggaaaaacatggg
ctgccgggtcgccctctgacgctctccaacgccgcgcggatgttgatccttggccattcc
tggcccggcaacatccgcgagctggacaatgccatagcctttgccgccgccctttgcgat
gacggggtgattacggcggaagaccttcccgatcatcttgcctccgcaacgtcagccccg
atgatcgacagtcgcggcgccgatctcggcgcgcttctggccgcctgcaacggcaatgtt
tcggaggccgcccgccggctcggcatcgatcgcacgacgatgcaccggcgaatgcgacgc
ctcggcatcggaaaacctcactag
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