Agrobacterium salinitolerans: CFBP5507_16095
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Entry
CFBP5507_16095 CDS
T08921
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03420
Nucleotide excision repair
asal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP5507_16095
03430 Mismatch repair
CFBP5507_16095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_16095
Enzymes [BR:
asal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP5507_16095
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5507_16095
MMR (mismatch excision repair)
Other MMR factors
CFBP5507_16095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_5
AAA_12
HHH
DEAD
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UYZ09235
UniProt:
A0A4Z1R647
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All DBs
Position
Linear:309463..311529
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AA seq
688 aa
AA seq
DB search
MAVAYLEKLNEQQRKAVEHGVGLTDGHTAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAATEMARRVERICKHVIGANSAIMTDALAWSGTFHGIGARLLRIYAEQI
GLNIDFTIHDREDSADLMNLARHELGFSKTESRFPTKGTCLAIYSRVVNSQTPLKEILRQ
HYPWVANWESELKHLFAAYVEAKQVQNVLDYDDLLLYWAQMVSDPILADDIGNRFDHVMV
DEYQDTNRLQASVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERESLERPKLVTVKDETEQANFIIDQIL
ANRETGMTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDTIATDPEPLLALAEIPPPPKTGDDWTTFTQM
LVGLRQGPNGWPGEIGQARLWYEPHLERIHEDADTRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLSLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGTTQEL
EEERRLLYVAMTRAKDSLSLITPQRFFTGGQNQQGDRHVYAARTRFIPATLLQFFETMAW
PLVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggaaaagctcaacgaacagcagcgcaaggcggtggagcatggc
gttgggctgacagatggccacacggccgggcctctgctgatcatcgccggggccggttcg
ggcaagaccaatacgctcgcccaccgtgtcgcacatctgatcgtgaatggtgccgatcca
cgccgtatcctgctgatgacgttttcgcggcgtgccgccacggaaatggcgcggcgggtc
gaacgtatctgcaaacatgttatcggggcgaattcggcaatcatgaccgacgcgctggcc
tggtccggcacgtttcacggcattggcgcacgcctgttgcgcatctatgccgagcagatc
ggactcaacatcgatttcaccatccacgaccgcgaggatagcgccgacctgatgaacctt
gcacggcacgagttggggttttccaaaaccgaaagccgctttccaacgaagggcacctgt
cttgcgatctattcgcgtgtggtgaattcccagacgccgctcaaggaaatattgcgccag
cattatccctgggttgccaactgggagagcgaactcaagcacctgtttgcagcctatgtg
gaggcaaaacaggtccagaacgtgctcgattacgacgatctcctgctttactgggcccag
atggtcagcgatcccatccttgctgacgatatcggcaaccgcttcgaccatgtgatggtc
gacgaatatcaggataccaaccggctgcaagcctcggtgctgatggcgctcaagcccggt
ggccgcgggttgaccgtggtgggtgacgatgcgcagtcgatctattccttccgggcggcg
acggtgcgaaacatcctcgattttccggcttccttcagccctgctgccgacatcatcacg
cttgaccgcaactatcgctcgacgcagccgatcctggccgccgctaacggcgtgatcgat
ttggcgcgcgagcggttcaccaagaacctctggacagagcgggagtctctggagcgtcca
aaactcgtgacggtgaaggacgaaaccgagcaggcgaatttcatcatcgaccagatcctc
gccaaccgcgaaaccggcatgacgctgaaacagcaggccgtgctgttccgcacctctagc
catagcgggccgctcgaggtggaactgacccgccgcaacatccccttcgtcaaattcggc
ggccttaaattcctcgacagcgcccatgtaaaggacatgctggcggtgctgcgcttcgcg
cagaacccgcgcgaccgcgtggcgggcttccggctgctacagatgctgcccggcattgga
ccgaagaaggccggcaatattctcgatacgatcgcgacagaccccgagccgttgcttgcc
cttgccgaaattccaccgccgccgaagaccggcgatgactggacaaccttcacgcagatg
ctggtgggcctgcgacagggccccaatggctggccgggtgaaatcgggcaggcgcggctg
tggtacgaaccgcatctcgagcgcatccacgaagatgcggacacccgcaaggccgatctg
ctgcaactcgagcagatcgccggcggctacccttcacgcgagcgcttcctgaccgagctt
acgcttgatccgcccgacgccaccagcgatcaggctggcgtgccgctgctcgatgaagat
tatctcagcctgtccaccatccattcggcaaaaggccaggagtggcgctccgtattcatt
ctgaacgtggtcgacgggtgcattccctccgacctcggtgtcggcaccacccaggaactg
gaggaagagcgccggctgctttacgtcgccatgacccgcgccaaggacagcctgtcactg
atcacgccgcaacgtttctttaccggcggccagaaccagcaaggcgaccggcatgtctac
gccgcaagaacccgcttcattccggcgaccttactgcaattcttcgagacgatggcctgg
ccgctggtttcagccgcagcttcggagcgcagcgcgcagcagatccgcattgacgtgggt
gcgcggatgcgcgccatgtggaaataa
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