Agrobacterium salinitolerans: CFBP5507_18785
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Entry
CFBP5507_18785 CDS
T08921
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asal
Agrobacterium salinitolerans
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asal03032
]
CFBP5507_18785
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_18785
Enzymes [BR:
asal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFBP5507_18785
DNA replication proteins [BR:
asal03032
]
Prokaryotic type
DNA Topoisomerases
CFBP5507_18785
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFBP5507_18785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UYZ09721
UniProt:
A0A4Z1QM86
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All DBs
Position
Linear:896232..897248
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AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVNDQEPGIAREKRGRGFCYRLPGGELLSDSVELKRIKALGVPPA
YRDVWICIDPAGHLQATGFDSRGRKQYRYHPDWHAFRGETKFFQLKSFGKALPAIRRRAI
ADIEKQGHGQEMTLAALTLLLDAAYLRVGNRSYLETNGTYGATTLLKRHVSFGETIELRF
AAKGGQRVKRQLRHPRLQKILEEISDLPGKELFVWQDSENRVHSVDSSDLNAYLSRIGGQ
GISAKTFRTWGGTLAAFCNAMEHVAAGDKPSIKGMCQAAAAELSNTPAICRKSYVHPAVL
DIATEEKAQKKLGRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccgccaacccgccttcttgccaaaatcggacttgcctatgtcaacgatcag
gagccgggcattgcccgggagaaacgcgggcgcggtttctgttaccgcctgccgggcggc
gagcttctctccgacagcgtcgaactgaagcgcatcaaagcgctcggcgtgccgcccgcc
tatagggacgtctggatatgcatcgaccccgccggccatctgcaggctacgggcttcgat
tcccggggacgaaaacaatatcgctatcatcccgactggcacgcgttccggggcgagacg
aaatttttccagctcaaaagcttcggcaaggcgctgcccgccatccgccgccgcgccatc
gccgatatagaaaaacagggccacgggcaggaaatgacgcttgcagcgctcacactgctg
ctcgatgccgcctatctgcgcgtcggcaaccgctcctatctcgaaaccaacggcacctat
ggcgcaacgacgctgctcaagcggcacgtctccttcggtgaaactatcgagttgcgattt
gccgccaagggcgggcagagggtaaaacggcaattgcgccacccgcgccttcagaaaatc
ctcgaggagatctccgacctgcccggcaaggaactctttgtgtggcaggacagtgaaaac
cgggtgcattcggtcgattccagcgacctcaacgcctacctctcccgcatcggcggacaa
ggcatttccgccaagacctttcgcacctggggtggaacattggcggccttctgcaacgcg
atggaacatgtggcggcgggtgacaagccaagcataaagggcatgtgccaggcagcggcg
gccgagctttccaacacgcccgccatctgccgcaagagctatgtgcacccggccgtcctc
gatatcgccacagaagaaaaagcgcagaaaaaacttggccgcatcttgaaggtcggggca
aagcccgtctccggcctcagggcggatgaaagacggctgctggccttcctgccttag
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