Agrobacterium salinitolerans: CFBP5507_23530
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Entry
CFBP5507_23530 CDS
T08921
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03030
DNA replication
asal03430
Mismatch repair
asal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5507_23530
03430 Mismatch repair
CFBP5507_23530
03440 Homologous recombination
CFBP5507_23530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asal03032
]
CFBP5507_23530
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_23530
Enzymes [BR:
asal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5507_23530
DNA replication proteins [BR:
asal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP5507_23530
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP5507_23530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UYZ10590
UniProt:
A0A4Z1QMV0
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All DBs
Position
Linear:1933654..1934634
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AA seq
326 aa
AA seq
DB search
MTSQLDFFSPAAARLPQAERGRKAGGRETTQKTATDDEALAAYLESTGNYRILRRLQPRA
VIDRPRSEFARQGVILDTETTGLDHRTDEIIEIGVITFTFDDNGTIGDVTGIYGGLRQPG
IAIPEEITRLTGITDEMVAGQSIDMGRLTALIAHADLIIAHNAGFDRPFCEAFSPIFRDK
AWACSVSEIDWRARGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQTRPGQSRTPF
SELHEASLRSRVRLYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWVELPEEKLEEELHF
LRTEIYRWDADPTVKYLTAFDRFKAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagttggattttttctctcccgcggcagcgcggcttccgcaggctgaaaga
gggcgaaaagcgggtggtcgcgaaacgacccaaaagaccgctacggacgatgaggccctt
gctgcttatcttgaatccacgggtaattatcgcatcctgcgccggttgcagccgcgcgcg
gtcatcgatcggccaaggtcggaattcgcccgtcagggcgtgatcctcgatacggaaacg
acgggcctcgaccatcggaccgacgagatcatcgaaatcggcgtcatcaccttcacattc
gacgataacggcacaatcggcgatgtcaccggcatctatggcgggttgcggcagcctggt
atcgccattcccgaagaaatcacccgtctgaccgggatcaccgacgagatggtggcgggg
cagtcgatagacatgggccggctaaccgccctcattgcccatgccgatctgatcatcgcc
cacaatgccggtttcgaccgccccttttgcgaggccttctcgccgatcttccgcgacaag
gcatgggcctgctccgtttcggaaattgactggcgcgcgcgtggtttcgagggcaacaaa
ctcggttatctgatcgggcaatccggctatttccacgacggccatcgtgccgtggacgat
tgtttcgccctgctggaagtgctggagcagacgcgccctggccagagtagaacgccgttt
tcagaactccatgaggcgagcctgcgctcaagggtgcgcctctacgcggaaaacagcccg
ttcgacatgaaggatcatctgaaaaagcggggctatcgctggtccgacggttccgatgga
cgaccgaaatcctggtgggtcgaactgccggaggaaaagctcgaagaggaactgcatttc
ctgcggaccgaaatttaccgctgggatgccgatcccacggtcaaatatctcaccgctttc
gaccggttcaaggccgggtga
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