Agrobacterium salinitolerans: CFBP5507_25830
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Entry
CFBP5507_25830 CDS
T08921
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
asal
Agrobacterium salinitolerans
Pathway
asal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFBP5507_25830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_25830
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFBP5507_25830
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UYZ10937
UniProt:
A0A4Z1R969
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All DBs
Position
pAtCFBP5507a:complement(303864..304676)
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AA seq
270 aa
AA seq
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MAVRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETQNRVVSHYVDSVTGKEVKD
EDEVKGYQRGENEYIMLEDEELENVALDSTKTIDISTFTPRDSVEWIWLDTPYYLSPNDP
VGQEAFSVIRDAMGAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDTYF
AGIDDEETADREMMPLVQQLIKKQTKHWDAKMVIDPVQERLLDIIAAKKKALKKPARAKP
SAPAKSTPSNVINIMDALKKSVAAENRSSK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccgtccctattggaaaggctatctcaagctctcgctcgtcacttgcccggtg
cagatgatgccggcgacctccgaaagcgagaaggtgcgattccacacactcaaccgcgag
acccagaaccgcgtggtcagccactatgtcgattcggtcaccggcaaagaggtcaaagac
gaagatgaggtcaaaggctaccagcgtggcgagaacgaatacatcatgctggaggacgag
gagctggagaacgttgcgctcgacagcaccaagaccatcgacatctccacattcaccccg
cgcgacagtgtggaatggatttggctcgacacgccgtattatctctcgcccaacgatccg
gtcggacaggaggcgttctccgtgatccgtgacgcgatgggagcccagaacatggtcggc
atttcgcggttggtgatctcgcgccgggaacgcgctgtcatgctggagccacgtggcaag
ggtatcgtcctatggacgttacgctacggggatgaggtccgcgacgaggatacctacttt
gcaggcatcgatgatgaggagacggcggacagggaaatgatgcctttagtgcagcagctg
atcaagaagcagacgaagcattgggatgctaagatggtcattgacccggtgcaggaacgg
ctgctcgacatcattgccgccaagaagaaggcgctgaagaagccggccagggcgaaaccg
tccgcgccagcaaagtcgacgccgagcaacgtcatcaacatcatggacgctctgaaaaaa
tcggtcgccgccgagaaccggtccagcaaatga
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