Agrobacterium salinitolerans: CFBP5507_25965
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Entry
CFBP5507_25965 CDS
T08921
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
asal
Agrobacterium salinitolerans
Brite
KEGG Orthology (KO) [BR:
asal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asal03400
]
CFBP5507_25965
DNA repair and recombination proteins [BR:
asal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CFBP5507_25965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
UYZ10961
UniProt:
A0A4Z1QS53
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All DBs
Position
pAtCFBP5507a:complement(333194..333649)
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AA seq
151 aa
AA seq
DB search
MADIVTPEVRSRMMAGIRGKNTKPELTLRRGLHAAGFRFRLHDRTLPGKPDIVFPKYRAV
LFAHGCFWHGHDCHLFKWPSSRPDFWQAKIHRNREVDALASAALQAAGWRQGIVWECALK
GKARLPIEKVLSECAAWLRSDIPFFEVRGSA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatcgttaccccggaggtccgcagccggatgatggctggcatccggggtaaa
aacacgaagccggaactaacgttgaggcgtggtttgcacgcggccgggttccggttccgg
ctacatgatcgcaccctgccgggaaagcccgatatcgtctttccaaaataccgggcggtt
ctctttgctcacggatgtttctggcacgggcatgattgtcatctgttcaaatggccctcc
agccggccggacttttggcaggcaaagattcacaggaatcgtgaggttgacgctcttgca
tcggctgccttgcaggcagcaggatggcggcagggaatcgtctgggaatgtgcgctaaaa
ggtaaggcccggttgccgattgagaaggtcctttccgagtgcgcggcgtggcttcggtcc
gatattccgtttttcgaggtcagggggagcgcatag
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