Aerococcus sanguinicola: AWM72_00705
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Entry
AWM72_00705 CDS
T04253
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
asan
Aerococcus sanguinicola
Pathway
asan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM72_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asan03019
]
AWM72_00705
Messenger RNA biogenesis [BR:
asan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWM72_00705
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4453
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
AMB93389
UniProt:
A0A0X8F9S7
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Position
145990..147663
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AA seq
557 aa
AA seq
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MKLKIKNHETAVFAIGGLGEIGKNMYCIQFQDEIIVLDAGVMFPEDDLLGIDYVISDYSY
LIENKDKIKGVFITHGHEDHIGGVPFLLKQVNVPIYAGALSLALIRGKLEEHHLLRDAEL
HEVDEDSVIKFRKTQVSFARVTHSIPDAMAICVKTPSGNIVFTGDYKFDFTPTGKKADLH
KLARLGDEGVLCLLGDSTNSEISGFTKSERVVSGALKDIIDKIEGRIIFASFASNISRLS
EAIDIAIANNRKVAVFGRSMENAVRNAQEIGYFDLPKGVLIDGKDINKYPSNEVMIMCTG
SQGEPMAALSRIANGTHRQISIQDGDTVIFSSSPIPGNTTSVNRVINKLLEAGAEVVHGK
INNVHTSGHGSQEEQKLMLSLLKPKYFMPVHGEYRMLSIQADTAVSLGIPRENTFIMDNG
DVLALTENSARRAGHIPANDVYVDGKGIGDIGNIVLRDRHKLSEDGLVLVVVSIDFETNQ
LLAGPAIVSRGFIYMRESEDLISDAQRVIQTAVIGHLNSGNKVNEKILRDSIQNSLQPFL
YKRTKRNPLIMSVVMSV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaatcaaaaaccatgaaactgctgttttcgccattgggggtttaggcgaa
atcggtaaaaatatgtactgtatccaattccaagatgaaatcatcgtcctcgatgcgggc
gttatgttcccagaagatgacctgctcggaattgactatgtaatttcagattattcctat
ctgattgaaaataaagacaagatcaagggcgtcttcatcacccatggccacgaagaccat
attggtggggtacccttcttgctcaagcaagtcaatgtgccaatctatgccggggccctt
tcactggctctgatccggggtaaattggaagagcaccacttgctccgtgacgctgagctc
catgaagtggatgaagatagcgtcatcaagttccgcaagacccaagtcagctttgcccga
gtgacccactctattccggatgccatggctatctgtgtcaagacaccttccggtaatatt
gtcttcacaggggactacaagtttgactttaccccgaccggcaagaaggctgacctgcac
aagctagcccgcctaggtgacgaaggggtcctttgcttactcggtgattccaccaactcc
gaaattagtggcttcaccaagtcagaacgggtcgtaagcggcgccttgaaagatattatc
gataaaatcgaaggccggattatttttgccagctttgcttcaaatatctcccggctttcg
gaagccatcgacattgccattgccaacaaccgtaaagtagccgtcttcggccggtccatg
gaaaatgccgtgcgcaatgctcaagagattggctacttcgacctaccaaaaggtgtctta
atcgacgggaaggacattaacaaatatccaagtaatgaagtcatgatcatgtgtaccgga
tcccagggtgaacccatggcagccttgagccggattgcgaacggcacccaccggcaaatc
tccatccaagatggggataccgttatcttctcctcctcccctattccagggaacacaact
agtgttaaccgcgtaattaacaaattgctggaagcaggagcagaagtggtccacggtaag
attaacaatgtccacacctccggccacggctcacaagaagaacaaaagctcatgctgagc
ctcttgaagcctaagtacttcatgccggtccacggggaataccgcatgctctccatccaa
gctgatacagcagtcagcctgggtatcccacgggagaataccttcatcatggacaacggt
gatgtcctcgccctgactgaaaattcagcgcgccgggcgggccatatccctgccaatgat
gtctatgtcgacggcaagggcatcggcgatatcggcaatattgtcctcagagaccgccat
aagttgtcagaagatggtctagttctagtggttgtcagcatcgacttcgagaccaaccaa
ttactagctggcccagccatcgtctctcgcggcttcatctacatgcgtgaatccgaagac
ctgatcagtgacgcccaacgtgtcatccagacagccgtcatcggtcacttaaattcaggc
aacaaagtcaacgaaaaaatcctacgtgacagcatccaaaactcactccaacccttccta
tacaaacggaccaaacgcaacccgctcatcatgtccgtcgtcatgtcagtttaa
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