Aerococcus sanguinicola: AWM72_05350
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Entry
AWM72_05350 CDS
T04253
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asan
Aerococcus sanguinicola
Pathway
asan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM72_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asan03019
]
AWM72_05350
03009 Ribosome biogenesis [BR:
asan03009
]
AWM72_05350
Enzymes [BR:
asan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWM72_05350
Messenger RNA biogenesis [BR:
asan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM72_05350
Ribosome biogenesis [BR:
asan03009
]
Prokaryotic type
rRNA helicases
AWM72_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
TTc_toxin_rep
Motif
Other DBs
NCBI-ProteinID:
AMB94221
UniProt:
A0A109RDE7
LinkDB
All DBs
Position
1201387..1202871
Genome browser
AA seq
494 aa
AA seq
DB search
MKFTEMGLSPRLLKAVDKMGFEEATPIQSETIPYALKGRDVLGQAQTGTGKTAAFGLPLL
EKIDPYAKEVQALVISPTRELAIQTGQELYQLGEEKRVQCLTVYGGSSIQRQLRQLEKKR
QVIVGTPGRLLDLIRRGKLDLSHIQTLVLDEADEMLNMGFIDDIEAIIAKTPADRQTLLF
SATMPKAIQRIGEQFMQDPIQVKIKAQEMTADLIDQYFTRCRESEKFDVLTRFIDVQDPV
LAIVFARTKRRVDEISRALIERGYTAEGLHGDLNQDKRSMLLRQFKDEKLDILVATDVAA
RGLDISNVTHVYNFDIPLDPDSYVHRIGRTGRAGRQGVSVTFVGPNELGYLRTIEDLTKK
KMMPLRPPSAKEAFSGRINQALEEVKKLTEEADPSYYQEAIDYLSAHYSTDQLALAVLSS
LTKDPNEVEVRITPERTPRKKSGGRKRKGSKRNNNKRSYQQHDKKGKKKSYQGSKDHPKG
KKRGSRKKASFDIR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagaaatgggtttgagcccgcgattattaaaagctgtcgataagatgggc
tttgaagaagccacaccgattcaatcagaaacaattccctatgccttaaaaggacgggat
gtcctgggccaggcgcagacggggacagggaagacggccgcttttggtcttcccctctta
gagaagattgatccctacgctaaggaagttcaagccttagttatttcgccaacccgggaa
ttggctatccaaactgggcaagagctctaccaattgggtgaagagaaacgggtccaatgc
ctgacagtttacggtgggagctcgatccaacggcaattgcgccaattggagaagaaacgg
caagtgatcgtggggacgcctggtcgtttgctcgacttgatccgtcgtggaaaattagac
ttgtcccacattcagaccttagtcctcgatgaggcggatgagatgcttaatatgggcttt
attgatgatattgaagcgattattgctaagacaccagcagaccgtcaaactctgctcttc
tcggcgaccatgcccaaggccatccaacgtattggggagcaatttatgcaggacccaatc
caggtgaagattaaggctcaggaaatgacggccgacctgatcgaccaatactttacccgc
tgtcgggagagtgaaaagttcgatgtcttgacccgtttcattgatgtccaagaccctgtc
ctagctattgtcttcgcacggaccaagcgccgggtggatgaaatttctcgtgccctgatt
gagcgcggctatactgcagaaggcctgcacggggacttgaatcaagacaagcggtctatg
ctgctccgccaatttaaagatgagaagctggatatcttagtggcaacggatgtggcagct
cggggcttggacatttctaatgtgacccatgtctacaactttgatattcccttggatccc
gatagctatgttcaccgcattggtcggacgggtcgggcaggccgccagggggtttcagtt
acctttgttggtcccaatgaattaggttacctgagaacgattgaagacctgaccaagaag
aaaatgatgcccctgcgtccaccatcggctaaggaagccttcagcggccggatcaaccag
gccttggaggaagttaagaaactgaccgaggaggccgatccttcttactaccaagaagcc
atcgactacctctccgcccactacagtacggaccaattggccctagcagttctcagcagt
ctaaccaaggatcctaatgaggttgaggttcggattacaccggaacgaactccgcgcaag
aagtcgggcggacgcaagcgcaagggctcgaagcgaaacaataataaacggtcttatcaa
caacacgataagaagggtaaaaagaagtcctatcaaggctccaaggaccatccaaaaggc
aagaaacggggctcacggaagaaagcatcctttgacattcgctag
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