KEGG   Anolis sagrei ordinatus (Brown anole): 132760862
Entry
132760862         CDS       T09595                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
asao  Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132760862 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asao03041]
    132760862 (CDC40)
Spliceosome [BR:asao03041]
 Complex C
  Other components
   Step II factors
    132760862 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_Vps41
Other DBs
NCBI-GeneID: 132760862
NCBI-ProteinID: XP_060609145
LinkDB
Position
Unknown
AA seq 580 aa
MSAAIAALASYGGSDSDSESGSDAEGRPNPPARVAGGDAVLHLASSASQALLPAVDSAPA
VAVKEDVETGLHLDPATKEVQYNPSYDTMFAPEFGPVNPFRTQQMAAPRNMLSGYTEPAH
INDFMFEQQRRTFATYGYALDPSIDNYEVSTKYIGSVEEAEKNQGLTVFETGQKKMEKRK
KFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQRELDEITAKRQKKGKHEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPL
SGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGNQFLSAAYDRYLKLW
DTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgtcggccgccatcgctgccctcgcctcgtatggcggctccgactctgactccgagtcg
ggctcggacgccgagggtaggcccaaccctccggcgcgggttgccggtggggatgcggtg
ctgcacctggcctcctcggcctctcaagcgcttctgcccgcggtggattcggccccggcc
gtggcggtgaaggaagatgtggaaacaggacttcaccttgatccagctaccaaggaagta
cagtataacccatcttatgataccatgtttgctccagagtttgggccagtgaatccattc
aggactcagcagatggctgcccctaggaatatgctttctggatacacagaaccagcacac
atcaatgatttcatgtttgaacaacagagaaggacatttgcaacttatggatatgccttg
gatccatcaatagataattatgaagtttccactaaatatattggttctgttgaggaagct
gaaaaaaatcaaggtttgacagtgtttgaaacaggacaaaagaaaatggagaaaaggaag
aaattcaaagagaatgatgcatctaatattgatggcttcttgggaccatgggcaaaatat
gttgatgaaaaggatgttgcaaagccctcagaagaagaacaaagagaattggatgaaata
acagcaaagaggcaaaagaaaggcaaacatgaagatgataaacctggagaagaaaagacc
attttgcatgtcaaagagatgtatgactatcaaggaaggtcctatcttcacgttccccag
gatgttggagttaaccttcgttcaacagtaccccctgaaaagtgttatcttcctaaaaag
caaatccatgtatggtctggtcataccaagggagtcagcgctgtcagattatttcctctt
tctggccacctgctgttgtcctgttccatggactgtaaaattaagctttgggaggtgtac
ggtgaacgaagatgcttacgaaccttcattggacacagcaaagctgtgagagatatctgt
tttaacaatgctgggaaccagtttctcagtgctgcgtatgaccggtatcttaaactctgg
gacacagaaacaggtcagtgtatttcaagattcactaatagaaaagtcccttactgtgtc
aaattcaatcctgatgaagataagcagaatctttttgtagcagggatgtcagataagaaa
attgtacagtgggatgttcgaagtggtgaaattgttcaggagtatgacaggcatttgggt
gctgtcaacactattgtatttgtggatgagaacaggaggtttgtgagcacatccgatgac
aagagtttgagagtctgggaatgggacattccagtagatttcaaatacatagcagagcca
agtatgcactcgatgcctgcagtgactttgtccccaaatggaaagtggttggcatgtcag
tccatggataatcagattctgatttttggagctcaaaacagattcaggttgaataaaaag
aaaatcttcaaaggtcatatggtggcgggttacgcttgtcaagtagatttttcacctgac
atgagttacgtgatatctggtgatgcagatggaaagctgaacatctgggactggaaaact
actaagttgtatagtagattaaaagcccatgacaaagtctgtataggtgcagtatggcac
ccacatgaaacatccaaggtgatcacttgtggttgggatggtctcattaaactctgggac
tga

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