Anolis sagrei ordinatus (Brown anole): 132766992
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Entry
132766992 CDS
T09595
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132766992 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132766992 (MTREX)
03041 Spliceosome [BR:
asao03041
]
132766992 (MTREX)
03009 Ribosome biogenesis [BR:
asao03009
]
132766992 (MTREX)
03016 Transfer RNA biogenesis [BR:
asao03016
]
132766992 (MTREX)
Enzymes [BR:
asao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132766992 (MTREX)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
132766992 (MTREX)
Spliceosome [BR:
asao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132766992 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
132766992 (MTREX)
Ribosome biogenesis [BR:
asao03009
]
Eukaryotic type
Pre-60S particles
Helicases
132766992 (MTREX)
Transfer RNA biogenesis [BR:
asao03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
132766992 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
Helicase_dom4_arc
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
132766992
NCBI-ProteinID:
XP_060617476
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MADAFGDELFSVFEEDASASASKKTKGAPEAVAGPVGKAGKRSEGKSTAPAKVPAKTKRE
EEADNGDIAVLGKKPKLDDFTAEDMNLADLMPKVKVQAVETVEGCTHEVALPADEDFIAL
KPRTGKAAKEYPFILDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRV
IFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMRE
VAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCH
VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRK
GGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFN
NAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETF
AMGINMPARTVLFTSARKFDGKDFRWITSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSP
SVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKV
TKLEQQYNEIEIPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVQNE
DDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLNCSKESLKNSATEAAKPAKPEEKGE
MQVVPVLLHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGI
KDPGLKKVIQKVEAFEHRMYSHPLHNDSNLETVYKLCERKAQIAVDIKAAKRELKKARTV
LQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQA
TALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIEEDTYLSSFKPN
LMDVVHTWANGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAE
GITKIKRDIVFAASLYL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccttcggggacgagctgttcagcgtgttcgaggaagatgcctccgcctcg
gcctcgaagaagacgaagggagcccccgaggcagttgctggccctgtgggcaaagctggg
aagcgatcagagggcaaatctacagcgcctgctaaagtcccagcaaaaacaaaacgagag
gaagaggctgataatggagacattgcagttttggggaagaagccaaagttggatgatttc
actgcggaagatatgaatttggccgacctgatgccaaaagtaaaggtgcaagcagtagaa
actgttgaaggctgtacacatgaggttgctcttcctgcggatgaagatttcatagccctt
aagccaagaactgggaaagctgcaaaggaatatccattcattcttgatgcttttcaaaga
gaagctattctgtgtgtggataacaatcagtcggttttagtttctgctcatacatcagca
ggaaaaacagtatgtgcagaatatgctattgcattggctttgagggaaaaacagcgtgtg
atctttaccagtccaattaaagctctaagtaaccaaaaatatcgtgagatgtatgaagaa
tttcaagatgttggtttaatgactggagatgtcaccatcaaccctacagcatcttgcctt
gtaatgacaaccgaaattttgagaagtatgctttatagaggttctgaggtcatgcgtgaa
gttgcctgggtcatctttgatgaaattcattacatgagagattcagaacgtggtgtggta
tgggaagaaaccattattttgctgccagataatgttcattatgtgtttctttctgccact
attccaaatgcacgccaatttgccgaatggatatgccatcttcacaaacagccttgccat
gtgatctacacagattaccggcccactcctctgcaacactatattttcccagcagggggc
gacggacttcaccttgtggttgatgaaaatggtgattttagggaagataattttaataca
gcaatgcaagtacttcgagacgctggtgacttagccaaaggagaccaaaaagggaggaaa
gggggaacaaaaggtccgtccaatgtatttaagattgtaaagatgattatggaaagaaac
tttcaacctgtaataatatttagtttcagtaaaaaagattgtgaagcatatgcacttcaa
atgacaaaattggacttcaatacagatgaagaaaaaaagatggttgaagaagtgtttaat
aatgcaattgactgtttatctgatgaggacaaaaaactgccacaagttgagcatgtgctg
ccgcttctgaagcgtggcattggaattcaccatggaggtttgcttcctattctgaaggag
acaatagaaatacttttctctgaaggactgataaaggcgttatttgcaacagaaacgttt
gcaatgggaataaacatgccagcaaggacagtgctattcacaagtgcccggaagtttgat
gggaaggacttccgatggatcacctcaggggaatatattcagatgtctggtcgtgctggc
cgccgtggcatggatgatagaggaatagtcattcttatggtggatgaaaagatgagccca
tcagttggaaaacagcttctgaagggatctgcagaccctctgaacagtgctttccatttg
acgtacaacatggtattaaatttgctgcgtgtggaagaaattaacccagaatacatgcta
gaaaaatctttttaccagttccaacattacagagcaattccaggagttgttgaaaaggtg
actaagttggaacagcagtacaatgaaattgaaattccaaatgaggaaaatgttgtcata
tactataaaatcaggcaacagcttgctaaactgggtaaagaaatagaagaatacattcat
aagccaaaatactgcttaccatttttacagccaggaagactagtaaaggtgcaaaatgaa
gatgatgattttggctggggagtggtggtaaatttctccaagaagtcaaatgtgaagcct
aactctggtgaactggacccactttatgtggttgaagtcctcctgaactgcagcaaagag
agcctgaaaaattctgcaacagaggcagcaaaaccagcaaaacctgaggagaaaggggag
atgcaggttgttcctgttcttttgcatcttctgtcagcaatcagtagtgttcggctttat
ataccaaaagacctgcggcctcttgataataggcagagtgtcctgaagtctatacaggaa
gtacaaaaacgatttcctgatggcgttcctctgctggaccctattgacgacatgggcatt
aaagatccaggtctgaaaaaagtaatccaaaaagtagaagcctttgagcacagaatgtat
tctcatccacttcacaatgattctaacttggaaactgtgtataaactttgtgaacgaaaa
gcacagattgctgtagacattaaagcagccaaacgggaactgaagaaagctaggacggtt
ttacaaatggatgagctcaagtgtcgtaaacgggttttgagaaggttgggttttgcaacc
tcttctgatgtcatagagatgaaaggacgagttgcttgtgaaattagcagtgcagatgag
ctgctgctgacggaaatgatgtttaatgggctattcaacgatttatctgcagaacaagca
acggctttactaagctgctttgtatttcaagaaaattccagtgaaatgcccaaactcaca
gaacagttggcaggacccctccgtcagatgcaggaatgtgcaaaaagaattgctaaagta
tcagcagaagctaaattggaaattgaggaggatacctatctcagttcttttaaaccaaac
ttgatggatgtggtgcacacatgggccaatggcgctacatttgctcacatatgcaaaatg
acagatgtatttgaaggaagcatcattcgatgcatgaggaggctggaagagttgcttcga
caaatgtgccaggcagcaaaggccattggaaacacagaactggagaacaaatttgcagaa
ggcattaccaaaatcaagagagacattgtatttgctgcaagcctttacctgtaa
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integrated database retrieval system
