Anolis sagrei ordinatus (Brown anole): 132768486
Help
Entry
132768486 CDS
T09595
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132768486 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132768486 (XAB2)
03041 Spliceosome [BR:
asao03041
]
132768486 (XAB2)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132768486 (XAB2)
Spliceosome [BR:
asao03041
]
Complex B
Other components
Prp19-related factors
132768486 (XAB2)
Complex C
132768486 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
ARM_TT21_C
TPR_15
ARM_TT21
NRDE-2
TPR_1
CKAP2_C
LTN1_E3_ligase_6th
TPR_16
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
132768486
NCBI-ProteinID:
XP_060620395
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAGGTNMAAEGEEKEEGRELRRTRPPLKGSQSDQGERRAAKRGGGGGERESWKVDGQHLD
VIFARRVWTEQEEAAMPELETVLGKRDLFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQN
APKHILNLIYERALKELPGSYKLWYNYLKQRRKQVKSRCVTDPSYEEVNNCHERALVFMH
KMPRIWLDYCQFLMDQCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVR
VYRRYLKLSPENAEEYIEYLRSIDRLDEAAVRLAAIVNDERFVSKEGKSNYQLWHELCDL
ISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVM
TVRDFTQVFDSYAQFEESMIAAKMETTSEMGREEEDDVDLELRLARFEQLITRRPLLLNS
VLLRQNPHNVHEWHKRVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYEV
NGQIEDARTIFEKATKVNYKQVDELASVWCEYGEMELRHENYDQALRILRKATAIPAKKA
EYFDSSEPVQNRVYKSLKVWSMLADLEESLGTFKSTKAVYDRILDLRIATPQIIINYGLF
LEEHNYFEESFKAYERGISLFKWPNVYDIWNTYLTKFIDRYAGKKLERARDLFEQALDGC
PQKYAKTIYLLYAKLEEEYGLARHAMAVYERATQAVQPSEQYDMYNIYIKRAAEIYGVTH
TRSIYEKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSYCSQISDPRTTANFWQTW
KEFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMD
DMKLLEQRAEQLAAEAERDQPRAKEKILFVRSDASRSELAELTKQANPDEIDIDLDEGDE
SEDNEPDEVQLEQQSVPSAVFGGLKDD
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgggactaacatggcggccgaaggagaagagaaagaggaggggcgagagctg
cggaggacacgccccccgctcaagggcagccaatcggatcagggagaacgccgcgcagcc
aaacggggggggggggggggggagagagagagctggaaggttgatggccaacacctcgac
gtcatttttgcgcgccgtgtttggactgagcaggaagaggccgcgatgccggagctggag
accgtgctggggaagcgggatcttttcttcgaggaggaagacctacagtatgaggaggaa
atcctgcgtaatcctttttctgtcaaatgctggattcgttacattgaattcaaacagaat
gccccaaagcatattctgaatctgatttatgagagagctcttaaagaattgccagggagc
tacaagctatggtataattatcttaagcagcgacggaaacaggtgaaaagcaggtgtgta
acagatccgagctatgaagaggtgaacaactgtcacgagcgcgcccttgtcttcatgcac
aagatgcctcgcatatggcttgattactgccagttcctcatggaccaatgtcggatcact
cgtacacgcaggacctttgaccgggcactccgggccctacccatcacacagcaccatcgt
atctggccactttacctgaaatttgtgcgcttgtatccattacctgaaacagctgtacga
gtctaccgcagatatttgaagctgagtccagagaatgctgaagagtatattgagtatctg
cgttccattgatcgcctagatgaggctgctgtccgccttgctgccattgtgaatgatgaa
cgctttgtttccaaggagggcaaatccaattatcagctatggcacgagctctgtgacctc
atctcacagaatccagataaggtgaaatctcttaatgtgggagccatcatccggggtggt
ctgacccgtttcactgaccagctgggcaagctgtggtgttccctggctgactactatatc
cgcagtggtcattttgagaaggctcgtgatgtgtatgaagaagctattcagacagtgatg
acggtgcgggatttcactcaagtttttgacagctatgcccagtttgaagagagtatgatt
gctgcaaagatggagaccacatcagagatggggcgtgaggaggaggatgatgtcgacctg
gagctgcgcctggcacgctttgagcagcttatcacacgccggcctctgcttctcaacagt
gtccttctgcgccagaatcctcacaatgtgcatgaatggcacaagcgagtgaagctgtat
gaaggcaagcctcgagagatcatcaacacgtacacagaagcagtgcagacggttgaccca
tttaaagccactgggaagacccacacactgtgggtttcttttgccaagttctatgaggtc
aatggacagatagaagatgccagaaccatctttgaaaaggccaccaaggtgaattacaag
caagtagatgaacttgccagtgtgtggtgtgagtatggagagatggagttgcggcatgag
aactatgaccaagcgctacgcatcctacggaaagctacagccatcccagctaagaaagca
gagtattttgattcctcagaacctgtgcaaaaccgtgtatacaagtccctcaaagtttgg
tccatgttggctgatttggaagaaagtctgggcacgttcaagtctactaaagctgtgtat
gaccgcattctggacctccgcattgccaccccccagatcatcatcaactatggcctcttc
ctggaagagcacaactactttgaggagagcttcaaggcatacgagagaggcatttcactc
ttcaagtggccaaatgtgtatgacatctggaatacctacctaacaaaattcatcgaccgc
tatgctggcaagaagctggagcgtgctcgggacctctttgaacaggcattggatggctgt
ccccagaaatatgctaaaactatctatctcctgtatgcaaagctggaggaggaatatggc
ttggcccgccatgctatggcagtgtatgagcgagccactcaggctgtgcaaccttcagag
cagtatgacatgtacaatatctacatcaagagagctgctgaaatctacggtgtcacacac
acccgcagcatctatgagaaggcaattgaggtgctgtcagatgaacatgcccgggagatg
tgcctgcgttttgctgatatggagtgcaagctgggtgaaatagatcgggctcgggccatt
tattcctactgttcacagatttctgatccccgtaccactgccaacttctggcagacatgg
aaggaatttgaaatccgacatgggaatgaagacactattcgggagatgctgcgcatcaaa
agaagcgtgcaggcgacctacaatactcaagtcaatttcatggcctctcaaatgcttaaa
gtttacagcaatgccacaggcacagtgtctgacttggcacctggacagagtggcatggat
gacatgaagctcttagagcagcgggcagagcagctggcagctgaagcagaaagagatcag
cctcgagcgaaggagaagatcctgtttgtcaggagcgatgcttcccgcagtgaattggct
gaactcaccaaacaggccaaccctgatgaaattgacattgacttggacgaaggagatgag
agtgaggacaatgagcccgatgaggttcagctggagcagcaaagcgtcccttcagctgtt
tttggaggactaaaggatgactaa
DBGET
integrated database retrieval system
