Anolis sagrei ordinatus (Brown anole): 132770921
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Entry
132770921 CDS
T09595
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132770921 (COL17A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132770921
NCBI-ProteinID:
XP_060624325
LinkDB
All DBs
Position
Unknown
AA seq
1510 aa
AA seq
DB search
MDAVTKKNKRDGTEVTERLITETVTTRLTSLPPKGGGSSGLKTTSYSGGSGVEKRTYSHG
GSYASASGSTRMNTSSSSSYKQATAPSSTLPKSPGSAFERKTYATRHATYEGSSSANSSP
EFPRKDLGSSATRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLRGSRSASASPTRSP
SGTLPIPKKAVVETKMVTESTQSVSGTYDTTILNAALPSYMWSSTLPAGSSLGGYHNNMA
QSSSLINTAAHSTGSVFGVPNNLAPSCPTLNTGLSTSSTVYGVQNNLVPNTVGAANSATT
ASTLTTGYGVKKNTVQQSSGVTSTGVSTSSTNAATTVGSQNDDILRKDCKFVILEKENIT
PKKEMELLVMSKDSGKVFNASGTGFSGGYYSEDTLKKDKQGMSSSYGGDSYLKSETNGGL
KSVSTKDKATYAEIQRDNGCGGPGAAPAWCPCASCCSWWKWLLGLLLAWLFLLGLLFGLI
ALAEEVRKLRSRVESLESRASYWQVPADGDQQLIAKKEAQYARLGAKLSDMNEYQLWSLM
KSRLDAEINQGYFRGEKGDMGLQGPKGDRGLPGIPGAPGMIGHAGPEGPKGQKGSMGESG
TEGPMGQRGREGPPGPRGEPGPPGFGEKGDKGPVGDSGPQGPPGVPGSIGPKGMTGSQGP
PGPPGLPGLQGFRGEAGLPGVKGEKGAMGTSGPKGDQGEKGPRGLTGEPGSRGLPGPTGE
PGPKGSAGPPGPDGHQGPRGEQGLMGTPGPRGPPGPSGDAGQPGLTGPQGPPGLTGSPGR
PGLKGEPGPPGRVTSSDGGSTIALAGPPGPPGAVGPPGPPGVPGPIGPAGLPGAQGPRGE
RGMPGESITVETSRLVEAAPLGASVQGPPGPPGPPGPPGLPGVSVEGPRGPRGPPGEGLP
GPPGPPGRPGSFVPTSETFFAGPPGPPGPPGPRGEQGTPGPRGFTGEPGQPGLPGLSAAG
AGVAIQGPPGPPGPPGPKGDAGVPGAPGIPGGAGSRTSQGPPGPPGPPGPPGPGMSSMRE
IQQYVSQYLQSDSGRYLIGPQGPPGPPGPPGISIGGSSLDYDELARRVMNYMSTSGSSFG
MSSSSISSSSTTLSYEDLLALLQREEIRPYLIGPQGPPGPPGPPGLGGDGSFTSLDYDEM
TRRVINYMTSSGISIGLPGPPGPPGLPGTSYGDILALLRDSEFSGIVGPPGPPGPPGIPG
SALSGLTREEILTYLQSVGYSSLSGPPGPPGPPGPPGLSGSGYVSQGDGIWTDEFRSDLI
QYLTSEDVRGFIRGPPGPPGPPGNFMAESYRGSANSDGSYGRSSSSGMSYDASLARRESY
SSSLGSNGELDGSLGAGGSYGGSLGAGGSYGGSLGAGGSYGGSLGADGSQMRSAGAGGSY
TGSFAGSLDYNELATRVSENMQSRGLLQDMMTYAMQGPPGPPGPPGIPGISRVFASYGNV
TADLMDFFRTYGTIPGPPGPKGEIGFPGPKGDTGPMGPPGRQGPRGPKGEKGEKGEQVYV
GRRKRRSIGV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtaacaaagaaaaacaaaagggatggaacagaagtcacagagaggcttatt
acagaaacagttaccaccaggttgacatctcttcctccaaaaggaggcgggagcagtggg
ctcaaaacaacaagttacagtggtgggagtggagtggaaaagaggacatacagtcacggt
ggcagctatgcctcagccagtggaagtactagaatgaatacctcctcttcctcctcctac
aagcaagctactgctccttcctctacacttcccaaatcacctggctcagccttcgaacga
aaaacctatgccactcgccatgcgacatatgaagggagctcaagtgcaaattcctctcca
gagtttcccaggaaagatcttggttcctctgctactaggggccggagccaaactcgtgag
agtgaaatccgagtgaggctgcaaagtgcttctccatcaaccaggtggacagaactggat
gatgtcaaacgactgcttcgaggaagtcgatcagctagtgccagcccaactcgctcccca
tcaggcacgcttcctatacccaagaaagctgttgtggaaaccaagatggttacagagagc
acacagtctgtgtcagggacatatgacaccaccatcttgaatgctgccctgccatcgtac
atgtggtcctccaccctgcctgcagggtcatctcttggcggttaccacaacaacatggcc
caaagctcatctctgatcaacactgcagcccattcgactggatcagtgtttggggtccca
aacaacttggctcccagctgtcccactctcaacactggtctcagcacatcttccacagta
tatggtgttcagaacaacctggtaccaaacacagttggtgctgccaacagtgcaaccaca
gcctccacattaacaactggatatggggtaaagaaaaatactgtgcagcagagctcagga
gtgactagtactggtgtgtccacctcatctacaaatgctgccaccacagtaggctctcag
aatgatgacatcctgcggaaagactgcaagtttgtgatcctagagaaagagaatataaca
cccaagaaggagatggagctgttggtcatgagtaaagacagcggaaaagtttttaatgca
tctggcactgggttcagtggaggttattattcagaagacactctgaagaaagacaagcag
ggcatgtcctcctcttacggtggggattcctacctgaaatcagaaactaatggaggatta
aaatctgtttcaacaaaggacaaagccacctatgcagaaatccagcgtgataatggctgt
ggagggccaggtgctgctcctgcctggtgtccttgtgcctcttgttgcagttggtggaag
tggctcctcggtttgctcctggcctggctgtttctgcttggcctgctctttgggcttatt
gctctagcggaggaagtgaggaagctgagatcccgtgtggagagtcttgagtcccgcgcc
agctattggcaagtacctgctgatggtgaccaacagctgattgccaagaaagaagcacaa
tatgccagacttggagcaaaactgagtgacatgaatgaatatcagctatggtcattaatg
aaaagtcgactcgatgcagagataaatcaaggttatttccgaggagaaaaaggtgatatg
ggacttcaaggaccgaaaggagacagagggctccctggtataccaggtgcaccaggcatg
ataggtcatgctggacctgaaggacctaaaggacaaaaaggtagcatgggtgaatctgga
accgagggtcccatgggccaaagaggccgagaaggacctccaggacctcgtggggagcca
ggtccacctggatttggagaaaaaggcgacaaaggcccggttggagattcaggacctcag
ggtccacccggtgtcccaggctctattgggcctaaaggtatgacaggttcacaaggtcct
cctggtcctcctggtcttcccgggcttcaaggatttagaggtgaagcaggtctcccaggt
gttaaaggtgaaaagggagccatgggaacatctggtccaaaaggtgatcaaggagaaaaa
ggtccccgtggtctcacaggtgaaccaggttccagaggactccctggacctacaggtgaa
ccaggacctaaaggatcagcaggtcctcctggaccagatggacaccaaggccccagagga
gagcaaggccttatgggaacaccaggcccacgaggtccacctggtccttctggagatgca
gggcagccaggtctcacaggacctcaaggacccccaggacttacaggtagtccaggccga
ccaggacttaaaggtgaacctggaccaccaggcagagttacttcttcagatggtggatcc
actattgctctcgctggacctccaggcccaccaggggcagttggaccaccaggcccacca
ggtgttccaggtccaattggccctgctggtcttcctggagctcaaggtcctcgtggtgag
aggggcatgccaggtgaatcaattacggtcgaaactagcagactggtagaggctgctcct
cttggagcaagtgtgcaaggacctccaggaccccctggacctccaggtccaccaggacta
ccaggtgtatccgttgaaggccctcgaggaccccgtggcccaccaggagaaggtcttcca
ggtcctccaggcccaccaggaagaccaggatcctttgtgcccacatcagaaactttcttt
gctggcccacctggtccacctggtcctccaggtccaaggggagaacaaggcacacctggc
ccacgaggattcacaggagaaccaggccaaccaggcctcccaggactttctgcagcaggt
gctggagttgccattcaaggaccaccagggccaccagggccaccaggacccaaaggtgat
gcaggtgtaccaggagcccctggcattcctggaggagcgggatcaagaacttctcagggt
cctccgggtccaccaggtcctcctggaccaccagggccaggaatgagctccatgcgagag
attcagcagtacgtctcccagtatctgcagagtgactctggacgttatctcattggacct
caaggcccacctggtcctccaggacctccaggaatctccattggtggctcatctttggac
tatgatgaattggcccgccgtgttatgaactacatgtctacttcaggttcctcatttggc
atgtcatcctcttctatctcttcttcctcaaccacactttcttatgaagatcttcttgcc
ttgctgcagagagaggaaatccggccatatctcattggtccccaaggtcccccaggtcca
cctgggccacctggactgggaggagatggctcatttacatcattggactatgatgaaatg
acaagacgggttatcaactatatgacaagttctggtattagtatcggccttcctggccca
cctggccctcctggtttgcctggaacatcttatggagacatcctagctctgctccgagac
tctgaatttagtggcattgtgggaccacctggtcctccaggcccacccgggataccaggc
agtgctctttccggcctcaccagagaggaaatcttgacatatctgcaaagtgtggggtat
tcatccctttctggaccccctgggccacccgggcccccagggccacctggcctttcagga
tctggctatgtttctcaaggtgatggtatctggactgacgagttcaggagtgatttgatc
caataccttactagtgaggatgtacgtggcttcatcagaggacctccaggacctccaggg
ccacctgggaactttatggctgaatcttacagagggtctgcaaattcagacgggtcatat
ggcaggtcttcaagttctggcatgtcttatgatgcatccttagccagaagggaatcctat
agcagttcattgggaagcaatggagaacttgatggatcgcttggagctggtggaagctat
ggaggctcacttggagcaggtggaagttatggtggttcactcggagcaggtggatcttat
ggtggctcacttggagcagatggatcacagatgagatcagcaggtgcaggaggctcctat
actgggtcatttgctggatcactggattataatgagctggcaaccagagtgtctgaaaat
atgcagagccgaggtctcctccaggacatgatgacttatgctatgcaagggccacctggg
cctccaggaccacctggcatcccaggcatcagcagggtgtttgcatcctatggcaatgtc
actgcagatctcatggatttcttcagaacttatggaacaattcctgggccacctggacca
aaaggagagataggattcccaggaccaaaaggtgacactggaccaatgggcccaccaggt
cgccaagggccaagaggaccaaagggtgaaaaaggcgaaaaaggtgaacaagtatatgtt
ggtcgaaggaaaagaagaagcataggagtctaa
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integrated database retrieval system
