Anolis sagrei ordinatus (Brown anole): 132772611
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Entry
132772611 CDS
T09595
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132772611 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132772611 (PATL1)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132772611 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
132772611 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
132772611
NCBI-ProteinID:
XP_060627487
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MFRYQSLEDCPLDEDDEAYHNLAEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEEKP
ASAGEQVDRGVTDEMDLLGDHEENLAERLSKMVIDNELEDPAIMQAVQTRPLVQHSTGLN
SSIWDGPSVLRRIRGPLLNQEVPSVSVLEYALPQRPPQAQEEEQDVSERALPRRSSSPVI
GSPPVRAVPIGTPPKQPTMPSFNQQILCPKPVHIRVPIQQRYPNPFSERMSPNQLCNVTN
SSLLGHPFPPSVTPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVSSPLASMNPKLLQGR
VGQIMPPASGFRAFFGAPPAPTQHHSPCPGAHLQNLRPQPQMFRPDTTHLHPQHRRLLHQ
RQQQNRSQHRNLNGSVGDRGNHRNNHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTDP
YLDDFYYQNYFQKLEKLSAAEDMHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLT
VSSVNNPRKMIDAVVTLRGEEDETKEKQVRDKRRQTLFTIEKTYSLLLDVEDYERRYLLS
LEGDRLALMEERKQKICDMYDNLRGKTSNQESKLSDDPFVQIMCIRKGKRMVGRILPFLS
TEQAANVLMATARNLPFLIKKDAQDEVLPCLLRPFSLVLYHLSLGTVACILQQLMNLPQS
TTAAPSANQHLTAVLQNKFGLSFLYLVLSRGEELQNSDSNIEHMQDNQWADLMFMATREL
LRIPQAALAKPVTPPSNLLSLFSRYVDRQKLNVLETKLQLIQGIR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtctctggaggactgccctttagatgaggatgatgaagcctatcat
aacttggctgaggaagatgaagatattgaccagttcaatgatgacacatttggagctggt
gcagttgatgatgactggcaggaagcccatgagaggctggcagagctggaagaaaagcct
gcatctgcaggggaacaagtggaccggggagtcaccgatgagatggacctgctgggggac
catgaagagaacctggcagagaggttgagcaaaatggtgattgataatgagctggaagac
ccagccatcatgcaggctgtgcaaactcgacctctggtacagcactcaactggccttaat
tcaagcatctgggatgggccttcagtactcaggcgaattagagggccacttctcaatcag
gaggttccctctgtgtcagtactagaatatgccctcccacagaggcctccccaagctcaa
gaagaggagcaggatgtttcggagcgagcgctgcctaggcggtcatcctcaccagtcatt
ggcagtcctcctgtgagggctgttcccattgggaccccacctaagcagcccaccatgccc
agctttaaccagcagatcttatgtccaaagcctgttcacatcagagtcccaattcagcag
cgttatccaaatcccttcagtgaaaggatgtctccaaaccaactctgcaatgtgacgaat
tcctccctcctgggacacccatttcctcccagtgttactcctgttctcacccacctccaa
agagcacagctactaggaggagcacaggctggtaggatgtctcccagccagtttgcacgg
gtgtctggccttgttagcagcccacttgcatccatgaaccccaaactcctccaaggcaga
gttgggcagattatgcccccagccagcggattccgtgccttctttggggcaccacctgca
ccaacacaacatcactccccatgtcctggagctcacttgcagaacctaaggcctcagcca
cagatgttcaggccagatacaactcaccttcacccacagcaccgacgactcttacatcag
aggcagcagcaaaacaggagtcagcaccggaatctaaatggatccgttggggaccgaggg
aatcatcgaaataaccaccaggaacaaatcagaaaggatccatatgccaatctcatgctt
cagcgggagaaggactgggtatccaagatccagatgatgcaactgcaaagcactgatccc
tacttggatgacttctattatcagaactactttcagaagctggaaaaattgtctgcagct
gaggatatgcatggtgatggtcctaagaaagagcgcactaagctgatcaccccacaagtt
gcaaagttagagcatgcctataagccagtgcagtttgaaggctcactggggaagctgaca
gtctccagtgtgaacaatcctcggaaaatgattgatgctgttgtgacactacgaggtgaa
gaagacgagacaaaagagaaacaggttcgagataaaaggcgtcagactctcttcacgatt
gagaagacatacagcctactcctggatgtagaagactatgagaggcgctacctcttgagc
ctggaaggggataggctagccttgatggaggagaggaagcagaagatctgtgatatgtat
gacaatctaagggggaaaacatccaaccaggaaagcaagctgagcgatgacccttttgtg
cagattatgtgcatccggaaaggaaagcgtatggttggccggatcctgcctttcttgtcc
actgaacaagctgccaacgttctcatggcaacagccaggaacctgcccttcctaatcaag
aaggatgcccaggacgaggtgctcccctgtttgctgaggcccttctcccttgttctctac
cacctatccctgggaactgtggcctgcatcctgcagcagctcatgaacctacctcagagc
acaacagcagctccatctgccaatcaacacctcacagctgtgctccagaacaagtttggc
ctctcttttctgtatttggtcttgagccgaggagaagaactgcaaaattcagactctaat
atagagcacatgcaagacaaccagtgggcggatctgatgttcatggcaacccgggagctt
ctccggatcccgcaggcagccttggcaaagccagtgactcccccttctaatctcttatca
ctcttctctcgctatgttgatcggcagaagctgaatgtgctagaaacaaagttgcagttg
attcaaggaatacgatag
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