Anolis sagrei ordinatus (Brown anole): 132774458
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Entry
132774458 CDS
T09595
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132774458 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asao03041
]
132774458 (PRPF38B)
Spliceosome [BR:
asao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132774458 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
132774458 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
132774458
NCBI-ProteinID:
XP_060630578
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MANNCPVLGAGNCHQPPPQHQQPPQPPGPPAGAVLSPPPLPLQSAGPKPAASGKQGNVLP
LWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAG
QTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYT
QPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKN
IDQQIKARPRKIKKDGKEGVEEVDRHAERRRSRSPRRSLSPRRSPRRSRSRSRHREGRGS
SSFDRELERERERQRLEREAKERDRERRQSRSSDRTLERRRSRSRERHRSRSRDRKGDRR
ERDREREKENERSRKKERDYDKDRGIERERERSRERDRSREKSKDRKCRSEIDERRHKDE
KDERRHREEKRDSKKERRHSRSRSRDRKHRSRSVSRNAGKHSRSRSKEKLSKHKSESKEK
SNKRSRSRSRGRTDSSEKSRKRDRSPSKERSRKRSKSKERSHKHDHSDKDHSNKHDRRSQ
STERENQKQSKNKDETV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaactgccctgtcctgggcgctggcaactgccaccagccccctccgcagcac
caacagccgcctcagccgcccgggccgccggccggagccgttctctcgccgccaccgctg
ccgctccagagcgcgggccccaagccggcggcctccggcaagcaaggcaacgtcctgccc
ctgtgggggaacgagaagaccatgaacctcaaccccatgatcctcaccaacatcctctcc
tcgccctacttcaaggtgcagctctacgagctcaagacctaccacgaggtggtcgacgag
atctacttcaaggttacacatgttgagccttgggagaaaggaagcagaaaaacggcaggc
cagacagggatgtgcggaggggtgcgtggtgttggaactggtggtatagtatctacagcc
ttttgtctcctctacaagttatttaccctgaagctaactcgtaagcaagtgatgggactg
ataacacatacagactctccttatattagggcccttggattcatgtatattaggtacaca
cagcctccaacagatttatgggactggtttgaatcttttcttgatgatgaggaggatctc
gatgtgaaagctggtggcggttgtgtcatgaccattggagaaatgctgcgttccttcctt
actaagcttgaatggttttctacattatttccaagaattcctgtaccagtccagaagaac
atagatcaacaaataaaagccagacctaggaaaatcaagaaggacggcaaggaaggagta
gaagaagtagacagacacgcagagcgtagacgttcaaggtctccaaggaggtccttgagt
cccaggaggtcacctagaagatcaagaagcagaagtcgtcaccgagaaggccgtggatca
tccagttttgatagagaattggaaagagaaagagagcggcaaaggctagaacgtgaagcc
aaggagagagacagggagaggcgacagtcccgaagttctgatcgaacgttggaacgtcgt
cgaagcagaagccgagagaggcacaggagtcgaagccgtgaccggaaaggagacagaaga
gagcgggacagggagagggagaaagaaaatgaacgcagtagaaagaaggagcgtgactat
gataaagacagaggcattgaaagggagagagagcgatccagagagagagatcgctcaaga
gaaaaatcaaaagacagaaaatgcagaagtgaaatagatgagaggaggcataaagatgaa
aaagatgaaaggagacatagagaggagaagagagattccaaaaaagagaggagacacagc
aggagccgaagtagggatcggaagcatagaagtagaagtgtgagtaggaatgctggcaag
cacagcaggagcaggagtaaagagaaattgagtaaacacaagagtgaaagtaaagagaaa
tcaaataaacggagtagaagcagaagcagaggaagaactgatagtagtgaaaagtcccga
aagcgagaccgtagccccagtaaagagaggtcgcgaaaacgtagcaaaagcaaagaacgt
tcccacaaacatgaccacagtgataaggaccactcaaacaaacacgatcgccggagccaa
agcacagaacgagagaatcaaaaacaatctaaaaacaaagatgagactgtatga
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