Anolis sagrei ordinatus (Brown anole): 132778120
Help
Entry
132778120 CDS
T09595
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132778120 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asao03041
]
132778120 (DDX42)
Enzymes [BR:
asao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132778120 (DDX42)
Spliceosome [BR:
asao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132778120 (DDX42)
Complex B
132778120 (DDX42)
Complex C
U2 SnRNP specific factors
132778120 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132778120
NCBI-ProteinID:
XP_060636767
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFSISTGKKEEPKLPQQSHSAFGATGSSAGFGKTPPPQLPSFY
KIGSKRANFDEENAYFEDEEEESNNVDLPYIPAENSPTRQQFHAKAPDSDSEDDPLEAFM
AEVEDQAARDMKRLEDKDKERKNTKGIRDDIEEEDDQEAYFRYMAENPNAGVVPEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFHEEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSVASHVRPERQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDITQIVEIFAS
GPNKWNWLTSRLVEFTSSGSVLLFVTKKANAEELANNLKQEGPSLGLLHGDMDQSERNKV
ISDFKKGAFPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTHKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSESVDRGSNNVMVNYEAYKPSSGAMGDRLSAMKAAFQSQYKSHFVAASFSNQK
TGSSSAGASGWTSAGSLNSVPTNSAQQNSAKSDSPMSPTGMAKGIPGFTSSGNLSSVPNF
PSAGVQGFNSVNVNNSGKEGNSGGRERYNENRGGGRHSDGQRHGEGGGRHGESQRHGEGY
RHGENRHGDGHRHGESRHSSGGNSASSRHGENRNNGDSRNSGESRNSENRNSESKKEGNN
RDNSKTDGFAVPEPPKRKKSRWDS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggccctggtaccaagagaggctttgggtttggtggattctcg
atatcaactggaaagaaggaagagcccaaacttcctcagcagtctcacagtgcttttgga
gccacaggttcttcagctggctttgggaagaccccaccacctcagctgccttctttttac
aagattggatcaaagcgagcaaactttgatgaagaaaatgcctactttgaggatgaggag
gaagaatccaataacgttgatttaccatacatccctgctgagaattctcctactcgtcag
cagttccatgccaaggcacctgactcagatagtgaggatgacccattggaggcattcatg
gcagaagtggaggatcaagctgctagagatatgaagaggctggaagataaagataaggaa
agaaagaacacaaagggtatacgcgatgatattgaagaggaagatgatcaagaagcttat
ttccgctacatggcagaaaaccccaatgctggtgtggttccagaagaggaggaggataac
ttggaatatgacagtgatggcaacccaatagcaccatccaaaaaaataattgaccctctt
cctcctattgatcattcagagattgaatatccaccgtttgagaagaatttccacgaagaa
cacgaagagatcaccagtctcactccacagcaagtggtggaactgcgccacaagctcaat
ctcagggtctctggagctgctcctccaaggccaggcagcagctttgctcattttggtttt
gatgaacaactgatgcaccagattagaaaatcagaatatactcagcccacccctatccaa
tgccagggcatcccagtggcattgagtggcagagacatgattggtattgcaaagactgga
agtgggaagactgctgctttcatttggccaatgttgattcatatcatggatcagaaggaa
ctggaaccaggagatggtcccattgcagtgattgtttgtccaaccagagagctgtgccag
cagatccatgcagaatgcaaacgttttgggaaggcctacaacctacgttcggtagctgtg
tatggtggaggaagcatgtgggaacaggccaaggctttgcaagaaggggcagaaattgtt
gtctgtactccaggccggttgattgatcacgtgaaaaagaaagcaacaaaccttcagaga
gtcacctaccttgtgtttgatgaagctgaccgaatgtttgacatgggatttgaataccaa
gtccgatcagtagccagccacgtgcgccctgaaaggcagactctactattcagtgcaacc
tttcggaagaagattgagaaactggcaagagacattctgattgacccaattcgagtggtt
caaggagatattggagaggccaatgaagatatcactcaaattgtggagatctttgcttct
ggtcccaacaagtggaactggctaacgagccgcctagtggaattcacctcttcagggagc
gtcctgctctttgtcaccaagaaggcaaatgcagaggaactggccaataaccttaaacaa
gaagggcccagcctgggtctgctgcacggtgacatggaccagagtgaaagaaacaaggtc
atctcagatttcaagaagggggccttcccagttctagttgccaccgacgtggcagctcgt
ggtttggatattccttctatcaagactgtgatcaattatgacgtggctcgtgacatcgat
acccacacccaccgcattggtcgtactggcagagctggggagaagggtgtggcctacact
ttactgactcacaaggacagcaattttgctggagaccttgttcggaatttggaaggggcc
aatcagcatgtttccaaagaactcttggatttggccatgcagaacgcttggttccggaaa
tcacgtttcaagggagggaagggcaagaagctaaacattggtggtggtggcctgggatac
cgtgagcgacctggccttggatcggaaagtgtggatcgtggaagcaataatgtcatggtc
aattatgaggcatataaaccatcctcgggagcaatgggagacaggctgtctgccatgaag
gccgcatttcagtctcagtataagagtcattttgttgctgccagctttagcaaccaaaag
acaggcagctcatctgcaggggccagtgggtggaccagtgctggcagcttaaactcagtg
ccaaccaattcagcacaacagaattcggcaaaatctgacagtcccatgagcccaacagga
atggcaaagggtatacctggcttcaccagcagtggaaacttaagcagcgtccccaacttc
ccaagtgccggagttcaagggtttaacagtgtgaatgtcaacaacagtggcaaagaaggc
aacagtggaggtagggagaggtacaacgagaatcgcggcggcggtcgccatagtgatggg
caacgccatggggaaggtggtggccgccatggcgagagccaacgccacggggaaggttat
cgccatggagaaaaccgccatggagacggccaccgtcacggtgaaagcaggcattctagt
ggtgggaacagtgccagtagtcgccatggggaaaaccggaacaacggggacagccggaac
agtggcgaaagcaggaacagcgagaatcggaatagcgagagcaagaaagagggtaacaac
agggacaacagcaagaccgatggttttgcagttcccgaacctccaaagcgcaagaagagt
cgatgggacagctaa
DBGET
integrated database retrieval system
